RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TMEM240Q5SV17 173 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 C9orf50Q5SZB4 431 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 USP49Q70CQ1 688 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 KCNK18Q7Z418 384 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 CHPFQ8IZ52 775 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 NETO2Q8NC67 525 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 C1orf162Q8NEQ5 155 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 CAGE1Q8TC20 777 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 POLR3CQ9BUI4 534 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 ZSCAN16Q9H4T2 348 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 NRBP2Q9NSY0 501 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 ASH2LQ9UBL3 628 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 FBXO2Q9UK22 296 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 ADAMTS6Q9UKP5 1117 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 TET1Q8NFU7 2136 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 SCN5AQ14524 2016 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 COL1A2P08123 1366 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 MYH9P35579 1960 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SMIM35A0A1B0GVV1 85 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 VWA3AA6NCI4 1184 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 FAM90A27PA6NNH2 459 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 CXCL10P02778 98 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 RPA1P27694 616 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 MARCKSP29966 332 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 YWHABP31946 246 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 GDNFP39905 211 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 CLCN3P51790 818 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 CEBPZQ03701 1054 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 FPGSQ05932 587 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 BFSP2Q13515 415 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 BECN1Q14457 450 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SLC39A14Q15043 492 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SHHQ15465 462 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 ARL6IP4Q66PJ3 421 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 EP400NLQ6ZTU2 488 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 LRRC8DQ7L1W4 858 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 CABP7Q86V35 215 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 DCP2Q8IU60 420 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 LINC00301Q8NCQ3 95 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 PHOSPHO1Q8TCT1 267 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 PIGOQ8TEQ8 1089 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 FAM167AQ96KS9 214 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 CLIC6Q96NY7 704 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 ZDHHC5Q9C0B5 715 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 FAM49AQ9H0Q0 323 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 TUFT1Q9NNX1 390 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 TNFRSF12AQ9NP84 129 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 XPNPEP1Q9NQW7 623 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 MYOTQ9UBF9 498 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 LRWD1Q9UFC0 647 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF180Q9UJW8 692 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SIT1Q9Y3P8 196 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 NUB1Q9Y5A7 615 aa8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 MORC2Q9Y6X9 1032 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-212ENST00000461239 SIP14410 1827 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 LCHNA4D1U4 455 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 RSPH10B2B2RC85 870 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 GPR32O75388 356 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 MAFO75444 373 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 C4BPAP04003 597 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 VTNP04004 478 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 CYP17A1P05093 508 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 RSPH10BP0C881 870 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 RBP3P10745 1247 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 PTPN1P18031 435 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 SDHAP31040 664 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TRHRP34981 398 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 GJA4P35212 333 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 RARRES1P49788 294 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 KRT85P78386 507 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TMEM62Q0P6H9 643 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TUSC3Q13454 348 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 PDCD1Q15116 288 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 PCBP2Q15366 365 aaKnown RBP eCLIP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 SPECC1Q5M775 1068 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 CATSPEREQ5SY80 951 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 HYIQ5T013 277 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 BICRALQ6AI39 1079 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 EFCAB12Q6NXP0 572 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TAF2Q6P1X5 1199 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF365Q70YC5 407 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 DEFB128Q7Z7B8 93 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 MYO1HQ8N1T3 1032 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TMEM199Q8N511 208 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 NEK9Q8TD19 979 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 CEP170P1Q96L14 293 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 LBHD1Q9BQE6 289 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 AGO3Q9H9G7 860 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 IL23AQ9NPF7 189 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 SRPRBQ9Y5M8 271 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 CDY2AQ9Y6F7 541 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 TANC1Q9C0D5 1861 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 KAT6AQ92794 2004 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms