RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 SERPINC1P01008 464 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 POU2F2P09086 479 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 CEBPBP17676 345 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 FCARP24071 287 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 ANXA13P27216 316 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 SLC8A3P57103 927 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 PSMC1P62191 440 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 IRF7Q92985 503 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 ELMO3Q96BJ8 720 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 HEXIM2Q96MH2 286 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 TMEM209Q96SK2 561 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 TRMT61BQ9BVS5 477 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 UBE2TQ9NPD8 197 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 CISHQ9NSE2 258 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 C2orf42Q9NWW7 574 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 PCDHB4Q9Y5E5 795 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 GCN1Q92616 2671 aaKnown RBP13.29□□□□□ -0.28
HDAC4-207ENST00000461113 ANK1P16157 1881 aa13.29□□□□□ -0.28
HDAC4-207ENST00000461113 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-207ENST00000461113 PAPSS2O95340 614 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-207ENST00000461113 TPM3P06753 285 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 RHOP08100 348 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 PTPN2P17706 415 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 GDI1P31150 447 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 GRIK1P39086 918 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 GCNT1Q02742 428 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 UBXN1Q04323 297 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 INCA1Q0VD86 236 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 TWF1Q12792 350 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 NCAPHQ15003 741 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 FAM78AQ5JUQ0 283 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 PLA2G2CQ5R387 149 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 CYP4A22Q5TCH4 519 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 FAM171BQ6P995 826 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 TRIM65Q6PJ69 517 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 Q6ZS52 159 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 RRAGAQ7L523 313 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 KBTBD6Q86V97 674 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 SCN4BQ8IWT1 228 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 CRYBG2Q8N1P7 616 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 LEMD2Q8NC56 503 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 MYLPFQ96A32 169 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 TMEM176AQ96HP8 235 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 LOXL4Q96JB6 756 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 SCNM1Q9BWG6 230 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 APEX2Q9UBZ4 518 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 SLC27A5Q9Y2P5 690 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
HDAC4-207ENST00000461113 FLNBO75369 2602 aaKnown RBP13.27□□□□□ -0.28
HDAC4-207ENST00000461113 SCN1AP35498 2009 aa13.27□□□□□ -0.28
HDAC4-207ENST00000461113 LRRC10BA6NIK2 292 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 ZNF197O14709 1029 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 TRIM66O15016 1216 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 ATP2C2O75185 946 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 CILPO75339 1184 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 SEC24AO95486 1093 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 FGF19O95750 216 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-207ENST00000461113 KRT5P13647 590 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 ZNF18P17022 549 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 MAGEA11P43364 429 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 IQCB1Q15051 598 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 MIIPQ5JXC2 388 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 SH3PXD2AQ5TCZ1 1133 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 LUZP1Q86V48 1076 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 TCEAL3Q969E4 200 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 SDCBP2Q9H190 292 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.29
HDAC4-207ENST00000461113 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
HDAC4-207ENST00000461113 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
HDAC4-207ENST00000461113 CSH1P0DML2 217 aa13.26□□□□□ -0.29
HDAC4-207ENST00000461113 CSH2P0DML3 217 aa13.26□□□□□ -0.29
HDAC4-207ENST00000461113 CD19P15391 556 aa13.26□□□□□ -0.29
HDAC4-207ENST00000461113 SLC9A1P19634 815 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms