RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 AP3M2P53677 418 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 NFKB2Q00653 900 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 NR0B2Q15466 257 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 LRIT3Q3SXY7 679 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 ANO6Q4KMQ2 910 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 TIGD5Q53EQ6 642 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 PRAMEF13Q5VWM6 474 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 CD300LGQ6UXG3 332 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 INTS8Q75QN2 995 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 LIMS2Q7Z4I7 341 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 HID1Q8IV36 788 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 HERC6Q8IVU3 1022 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 THNSL1Q8IYQ7 743 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 CMTR2Q8IYT2 770 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 HACE1Q8IYU2 909 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 LILRA2Q8N149 483 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 CSGALNACT2Q8N6G5 542 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 GAL3ST3Q96A11 431 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 SLC35C1Q96A29 364 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 BICD1Q96G01 975 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 FAXDC2Q96IV6 333 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 GAD1Q99259 594 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 TSG101Q99816 390 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 FAM213AQ9BRX8 229 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 SRRTQ9BXP5 876 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 NAT10Q9H0A0 1025 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 SLC6A17Q9H1V8 727 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 MTIF3Q9H2K0 278 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 PCIF1Q9H4Z3 704 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 ZNF552Q9H707 407 aaPredicted RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 RPF1Q9H9Y2 349 aaKnown RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 RSAD1Q9HA92 442 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 TOPORSQ9NS56 1045 aaPredicted RBP6.09□□□□□ -1.43
PTPN12-209ENST00000460731 INSL6Q9Y581 213 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 PCDHA11Q9Y5I1 949 aa6.09□□□□□ -1.43
PTPN12-209ENST00000460731 GTPBP10A4D1E9 387 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GOLGA8IPA6NC78 632 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GOLGA8JA6NMD2 632 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 C5orf67F2Z3F1 127 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TMEM189-UBE2V1I3L0A0 370 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 PIRO00625 290 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 P4HA2O15460 535 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 B4GALT3O60512 393 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 EXOC3O60645 756 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 C4BPAP04003 597 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 FAM163BP0C2L3 166 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 CXCL8P10145 99 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 FGFR1P11362 822 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 ATP2A2P16615 1042 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 AKAP5P24588 427 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 EEF1GP26641 437 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GSTT1P30711 240 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 RPL9P32969 192 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 AARSP49588 968 aaKnown RBP eCLIP6.08□□□□□ -1.442e-6■■■■■ 32.8
PTPN12-209ENST00000460731 CYP2J2P51589 502 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 VAMP7P51809 220 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 STX17P56962 302 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 SMAD3P84022 425 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 MYL5Q02045 173 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 BFSP1Q12934 665 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GRIK3Q13003 919 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 ZACNQ401N2 412 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TCERG1LQ5VWI1 586 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 KLHL10Q6JEL2 608 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 DPY19L2P1Q6NXN4 242 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GLB1LQ6UWU2 654 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 HDXQ7Z353 690 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GGNQ86UU5 652 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 WDR49Q8IV35 697 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 EFCAB13Q8IY85 973 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 COLGALT2Q8IYK4 626 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 GPR65Q8IYL9 337 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 RNF168Q8IYW5 571 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TDHQ8IZJ6 230 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 LMO3Q8TAP4 145 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 LPPQ93052 612 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 SAAL1Q96ER3 474 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 Q96M66 194 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TMEM175Q9BSA9 504 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 MRPL9Q9BYD2 267 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TRIM6Q9C030 488 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 CWH43Q9H720 699 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 PDE11AQ9HCR9 933 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 SAMSN1Q9NSI8 373 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 SLC38A7Q9NVC3 462 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 TBC1D13Q9NVG8 400 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 INTS13Q9NVM9 706 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 FANCLQ9NW38 375 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 RBAKQ9NYW8 714 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 ANKFY1Q9P2R3 1169 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 ARMCX3Q9UH62 379 aaPredicted RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 LIMA1Q9UHB6 759 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 FRMD4BQ9Y2L6 1034 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 NFE2L3Q9Y4A8 694 aa6.08□□□□□ -1.44
PTPN12-209ENST00000460731 PDCD11Q14690 1871 aaKnown RBP6.08□□□□□ -1.44
PTPN12-209ENST00000460731 PTPRJQ12913 1337 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms