RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 E7ESA3 106 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 AP1G1O43747 822 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 PEX2P28328 305 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 CPOXP36551 454 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
SSR4-206ENST00000460616 SIAH1Q8IUQ4 282 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 E2F7Q96AV8 911 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 VCPIP1Q96JH7 1222 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 PRICKLE1Q96MT3 831 aaPredicted RBP16.13■□□□□ 0.17
SSR4-206ENST00000460616 ZNF395Q9H8N7 513 aaPredicted RBP16.13■□□□□ 0.17
SSR4-206ENST00000460616 PARVAQ9NVD7 372 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 MARCOQ9UEW3 520 aaPredicted RBP16.13■□□□□ 0.17
SSR4-206ENST00000460616 PPME1Q9Y570 386 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 ZHX2Q9Y6X8 837 aa16.13■□□□□ 0.17
SSR4-206ENST00000460616 MEI4A8MW99 385 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 STK10O94804 968 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 SERPINA6P08185 405 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 ECE1P42892 770 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 PEX3P56589 373 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 SLC25A3Q00325 362 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 FOLH1Q04609 750 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 NCOA4Q13772 614 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 UBAP2LQ14157 1087 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 TFDP3Q5H9I0 405 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 CDHR3Q6ZTQ4 885 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 CATSPER2Q96P56 530 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 C10orf88Q9H8K7 445 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 hCG_1818297A0A087WSY0 165 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 GTF2H1P32780 548 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 RPL7AP62424 266 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 MTMR2Q13614 643 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 TRIP10Q15642 601 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 KBTBD12Q3ZCT8 623 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 CRLF3Q8IUI8 442 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 ICA1LQ8NDH6 482 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 TMC2Q8TDI7 906 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 SLC44A1Q8WWI5 657 aa16.12■□□□□ 0.17
SSR4-206ENST00000460616 DCPSQ96C86 337 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 ACSF2Q96CM8 615 aaPredicted RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 GLIS2Q9BZE0 524 aaPredicted RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 DDX18Q9NVP1 670 aaKnown RBP16.12■□□□□ 0.17
SSR4-206ENST00000460616 TCRBV7S3A2A0A539 114 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 CLPTM1O96005 669 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 TSHRP16473 764 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 RPL26P61254 145 aaKnown RBP16.11■□□□□ 0.17
SSR4-206ENST00000460616 PRKG1Q13976 671 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 C1orf228Q6PIY5 440 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 USP37Q86T82 979 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 SLC35B2Q8TB61 432 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 SH2D3AQ9BRG2 576 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 ST6GALNAC4Q9H4F1 302 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 SAE1Q9UBE0 346 aaPredicted RBP16.11■□□□□ 0.17
SSR4-206ENST00000460616 XPO7Q9UIA9 1087 aaKnown RBP16.11■□□□□ 0.17
SSR4-206ENST00000460616 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 C15orf38-AP3S2A0A0A6YYH1 394 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 A0A0J9YVX5 310 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 NDUFB10O96000 172 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 SERPINB6P35237 376 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 GDF10P55107 478 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 NOMO3P69849 1222 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 SFSWAPQ12872 951 aaKnown RBP16.11■□□□□ 0.17
SSR4-206ENST00000460616 CCNIQ14094 377 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 CHI3L2Q15782 390 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
SSR4-206ENST00000460616 FBXL19Q6PCT2 694 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 KLHDC10Q6PID8 442 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 B3GNT9Q6UX72 402 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 ARPINQ7Z6K5 226 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 IRGQQ8WZA9 623 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 MFSD14AQ96MC6 490 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 BLOC1S6Q9UL45 172 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 EXOC7Q9UPT5 735 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 PCDHGA4Q9Y5G9 962 aa16.11■□□□□ 0.17
SSR4-206ENST00000460616 TCRBV9S1A1TA0A576 114 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 STRNO43815 780 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 ATP6V1G1O75348 118 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 TFAP2AP05549 437 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 ATP5BP06576 529 aaKnown RBP16.1■□□□□ 0.17
SSR4-206ENST00000460616 SMIM18P0DKX4 95 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 AOC1P19801 751 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 RPL22P35268 128 aaKnown RBP16.1■□□□□ 0.17
SSR4-206ENST00000460616 EPHB1P54762 984 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 PSMC5P62195 406 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 IRX4P78413 519 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 CDK18Q07002 472 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 TBL3Q12788 808 aaKnown RBP16.1■□□□□ 0.17
SSR4-206ENST00000460616 CYLC2Q14093 348 aaPredicted RBP16.1■□□□□ 0.17
SSR4-206ENST00000460616 RALGPS1Q5JS13 557 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 TRIM72Q6ZMU5 477 aa16.1■□□□□ 0.17
SSR4-206ENST00000460616 PHF13Q86YI8 300 aaPredicted RBP16.1■□□□□ 0.17
SSR4-206ENST00000460616 NUDCD3Q8IVD9 361 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms