RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 SPSB4Q96A44 273 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 HMCESQ96FZ2 354 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 C22orf23Q9BZE7 217 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 A1CFQ9NQ94 594 aaKnown RBP4.31□□□□□ -1.72
TTC3-211ENST00000460328 SACM1LQ9NTJ5 587 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 STK32BQ9NY57 414 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 DNMT3BQ9UBC3 853 aaKnown RBP4.31□□□□□ -1.72
TTC3-211ENST00000460328 CPNE7Q9UBL6 633 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 USP22Q9UPT9 525 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
TTC3-211ENST00000460328 MBD3L4A6NDZ8 208 aaPredicted RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 MBD3L3A6NE82 208 aaPredicted RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 BTBD19C9JJ37 291 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 KCNAB3O43448 404 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 RGS10O43665 173 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 MARCH6O60337 910 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 NTN1O95631 604 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 MT-CO3P00414 261 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 APEHP13798 732 aaKnown RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 UQCRC1P31930 480 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 MTHFSP49914 203 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 SUMO3P55854 103 aaPredicted RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 LAMB3Q13751 1172 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 INSCQ1MX18 579 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 SHC4Q6S5L8 630 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 KRT73Q86Y46 540 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 RAB11FIP4Q86YS3 637 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 OSR1Q8TAX0 266 aaPredicted RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 RUNDC1Q96C34 613 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 CTHRC1Q96CG8 243 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 VN1R3Q9BXE9 311 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 XPNPEP3Q9NQH7 507 aa4.3□□□□□ -1.72
TTC3-211ENST00000460328 NOB1Q9ULX3 412 aaKnown RBP4.3□□□□□ -1.72
TTC3-211ENST00000460328 LOC105371045A0A1W2PR82 267 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 CFAP69A5D8W1 941 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 TRIM43BA6NCK2 446 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 FAM227AF5H4B4 570 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 H7C4K7 107 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 PYCARD-AS1I3L0S3 204 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 SOCS2O14508 198 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 CD3EAPO15446 510 aaKnown RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 SPRY2O43597 315 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 RASSF9O75901 435 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 FGBP02675 491 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 A1BGP04217 495 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 BRAFP15056 766 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 KLRC1P26715 233 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 EPHA3P29320 983 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 DIO1P49895 249 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 ITGA8P53708 1063 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 GHRHRQ02643 423 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 FHL1Q13642 323 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 TMEM65Q6PI78 240 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 APOA5Q6Q788 366 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 RAVER1Q8IY67 606 aaKnown RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 NRACQ8N912 160 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 PIGOQ8TEQ8 1089 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 PNISRQ8TF01 805 aaKnown RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 TRIM43Q96BQ3 446 aaPredicted RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 SUCLG2Q96I99 432 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 ZBTB45Q96K62 511 aaPredicted RBP4.29□□□□□ -1.72
TTC3-211ENST00000460328 STK31Q9BXU1 1019 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 TRIM5Q9C035 493 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 SNX15Q9NRS6 342 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 PAXBP1Q9Y5B6 917 aa4.29□□□□□ -1.72
TTC3-211ENST00000460328 CACNA1IQ9P0X4 2223 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 LOC102723971A0A1B0GUV8 181 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 M0R3H8 397 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 TRIM38O00635 465 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 CCP110O43303 1012 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 PRPF3O43395 683 aaKnown RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 RRP9O43818 475 aaKnown RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 RNF8O76064 485 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 HGFP14210 728 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 PHKG2P15735 406 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 CREB1P16220 341 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 PTDSS1P48651 473 aaKnown RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 POLGP54098 1239 aaPredicted RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 TIRAPP58753 221 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 TIAL1Q01085 375 aaKnown RBP eCLIP4.28□□□□□ -1.724e-9■□□□□ 10.2
TTC3-211ENST00000460328 LARS2Q15031 903 aaKnown RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 DENND2CQ68D51 928 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 KIAA0319LQ8IZA0 1049 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 LINC01465Q8N7H1 131 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 C16orf52Q8NHV5 167 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 MAFAQ8NHW3 353 aaPredicted RBP4.28□□□□□ -1.72
TTC3-211ENST00000460328 ZNF398Q8TD17 642 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 CUL5Q93034 780 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 WACQ9BTA9 647 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 MGAT4CQ9UBM8 478 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
TTC3-211ENST00000460328 PIAS2O75928 621 aa4.27□□□□□ -1.73
TTC3-211ENST00000460328 ZKSCAN1P17029 563 aaPredicted RBP4.27□□□□□ -1.73
TTC3-211ENST00000460328 HOXD9P28356 352 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms