RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MCL1Q07820 350 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 SIX1Q15475 284 aaPredicted RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 GOLGA7BQ2TAP0 167 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 NME8Q8N427 588 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 DTNBP1Q96EV8 351 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 MMADHCQ9H3L0 296 aaPredicted RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 CPA4Q9UI42 421 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 TTLL3Q9Y4R7 772 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 A6NJR5 290 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 MAGEB2O15479 319 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 ZBED1O96006 694 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 EIF4BP23588 611 aaKnown RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 MAGEA8P43361 318 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 SYDE1Q6ZW31 735 aaPredicted RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 APLFQ8IW19 511 aaPredicted RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 CCNYQ8ND76 341 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 STYXL1Q9Y6J8 313 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 EVPLQ92817 2033 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 KCNN4O15554 427 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 LIASO43766 372 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 APRTP07741 180 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 CALB2P22676 271 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 ARL4CP56559 192 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 IRX4P78413 519 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 DNAJC3Q13217 504 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 TRABDQ9H4I3 376 aa16.07■□□□□ 0.16
LMNB1-203ENST00000460265 XPO7Q9UIA9 1087 aaKnown RBP16.07■□□□□ 0.16
LMNB1-203ENST00000460265 RARBP10826 455 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 CYP2C9P11712 490 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 LBRQ14739 615 aaKnown RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 GRIK4Q16099 956 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 CYP4X1Q8N118 509 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 LRRC8CQ8TDW0 803 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 SEC14L1Q92503 715 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 LRRC42Q9Y546 428 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 LSM8O95777 96 aaKnown RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 PHBP35232 272 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 VCPP55072 806 aaKnown RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 SERPINB12Q96P63 405 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 ROPN1BQ9BZX4 212 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 ELOVL4Q9GZR5 314 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 ROPN1Q9HAT0 212 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 ARHGEF3Q9NR81 526 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 TNFSF13BQ9Y275 285 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 ERBB2P04626 1255 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 BNIP1Q12981 228 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 STAT4Q14765 748 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 CYP1B1Q16678 543 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
LMNB1-203ENST00000460265 RNPEPL1Q9HAU8 725 aa16.06■□□□□ 0.16
LMNB1-203ENST00000460265 CAPN9O14815 690 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 LRCH4O75427 683 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 SERPINB4P48594 390 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 TAP1Q03518 808 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 MBTD1Q05BQ5 628 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 PPIL2Q13356 520 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 APBB1IPQ7Z5R6 666 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-203ENST00000460265 WDTC1Q8N5D0 677 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 DNAAF2Q9NVR5 837 aaKnown RBP16.05■□□□□ 0.16
LMNB1-203ENST00000460265 DCTN4Q9UJW0 460 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ATP8B3O60423 1300 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 PFDN1O60925 122 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 PIGRP01833 764 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 INHBAP08476 426 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ASPAP45381 313 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 SLC26A2P50443 739 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ROR1Q01973 937 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 GAD2Q05329 585 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 RCN2Q14257 317 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 SLC10A6Q3KNW5 377 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 CEP128Q6ZU80 1094 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 PPM1NQ8N819 430 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 MIPOL1Q8TD10 442 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
LMNB1-203ENST00000460265 TLCD1Q96CP7 247 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ZNF518BQ9C0D4 1074 aa16.05■□□□□ 0.16
LMNB1-203ENST00000460265 ABLIM1O14639 778 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 CTSHP09668 335 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 GPD1P21695 349 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 IL1R2P27930 398 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 PKN2Q16513 984 aaKnown RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 C1QTNF12Q5T7M4 302 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 DNAJB3Q8WWF6 145 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 C18orf25Q96B23 403 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 EPB41L4BQ9H329 900 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 PIH1D1Q9NWS0 290 aaKnown RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 ASB3Q9Y575 518 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms