RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 LCP1P13796 627 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 MTHFRP42898 656 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 RGS7P49802 495 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 GSCP56915 257 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 SLC6A3Q01959 620 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 GFPT1Q06210 699 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 ADIGQ0VDE8 80 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 MTA1Q13330 715 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 KCNC3Q14003 757 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 ASTE1Q2TB18 679 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PM20D1Q6GTS8 502 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 DNAJC24Q6P3W2 148 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PDZD4Q76G19 769 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 BEND5Q7L4P6 421 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 ARCQ7LC44 396 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 RHOT2Q8IXI1 618 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 MCOLN2Q8IZK6 566 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 ZMIZ2Q8NF64 920 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PCDHB18PQ96TA0 734 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 AVENQ9NQS1 362 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 CLDND1Q9NY35 253 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 COG5Q9UP83 839 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 USP3Q9Y6I4 520 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 TNRC18O15417 2968 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-206ENST00000460235 FAM92AA1XBS5 289 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 SOWAHDA6NJG2 315 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 TMCO5BA8MYB1 307 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 E5RJQ4 531 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CCL16O15467 120 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 BEST1O76090 585 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 VNN2O95498 520 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CALCAP01258 141 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 TMEM253P0C7T8 217 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 ATF6P18850 670 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 SSTR3P32745 418 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-206ENST00000460235 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-206ENST00000460235 YWHAZP63104 245 aaKnown RBP12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.33
HDAC4-206ENST00000460235 BTBD8Q5XKL5 378 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 DCUN1D2Q6PH85 259 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 MON1BQ7L1V2 547 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 ZNF276Q8N554 614 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 C3orf20Q8ND61 904 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 FAM149B1Q96BN6 582 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 ZNF653Q96CK0 615 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CPXM1Q96SM3 734 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 NACA2Q9H009 215 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 CRISPLD1Q9H336 500 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 UVRAGQ9P2Y5 699 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 STAP1Q9ULZ2 295 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
HDAC4-206ENST00000460235 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 KRT86O43790 486 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 USP17L7P0C7H9 530 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 KRT3P12035 628 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 GBP1P32455 592 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 TUBP50607 506 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 EPHA5P54756 1037 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 DAOAP59103 153 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 YWHAGP61981 247 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 IFRD2Q12894 506 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 TAF10Q12962 218 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 ADGRE1Q14246 886 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 COL19A1Q14993 1142 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 CCDC142Q17RM4 750 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 PTPN20Q4JDL3 420 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 FAM102AQ5T9C2 384 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 RSRC2Q7L4I2 434 aaKnown RBP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 SLC26A9Q7LBE3 791 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 GPR149Q86SP6 731 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 TTC9BQ8N6N2 239 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 POPDC2Q9HBU9 364 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 SPTLC3Q9NUV7 552 aa12.95□□□□□ -0.34
HDAC4-206ENST00000460235 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 ZFP37Q9Y6Q3 630 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-206ENST00000460235 COL4A4P53420 1690 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 A0A0A6YYK5 440 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-206ENST00000460235 SIGLEC16A6NMB1 481 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms