RNA–Protein interactions for RNA: ENST00000459737.5

KTN1-208, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 4,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-208	ENST00000459737	KLHL23	Q8NBE8	558 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	NEK9	Q8TD19	979 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	CCHCR1	Q8TD31	782 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TEKT4	Q8WW24	435 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TRIM47	Q96LD4	638 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	C7orf26	Q96N11	449 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	SH3GL3	Q99963	347 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	CORO1B	Q9BR76	489 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TDRD1	Q9BXT4	1180 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	UBA5	Q9GZZ9	404 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	INTS2	Q9H0H0	1204 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	TNKS2	Q9H2K2	1166 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	UNC45A	Q9H3U1	944 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	ACSS3	Q9H6R3	686 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	AVEN	Q9NQS1	362 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	QPCTL	Q9NXS2	382 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	GCNT4	Q9P109	453 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	BCCIP	Q9P287	314 aa	Known RBP eCLIP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	SAE1	Q9UBE0	346 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	SRRD	Q9UH36	339 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FAM237B	A0A1B0GVD1	139 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FAM159B	A6NKW6	160 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	BOLA2-SMG1P6	H3BVE0	249 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PSMA7	O14818	248 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TBX3	O15119	743 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	GCAT	O75600	419 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PIGR	P01833	764 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	ITGAV	P06756	1048 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FAM157B	P0CG42	384 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	HSPA1A	P0DMV8	641 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	HSPA1B	P0DMV9	641 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	DLAT	P10515	647 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	MAPT	P10636	758 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	ZNF24	P17028	368 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MMP8	P22894	467 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	IGFBP6	P24592	240 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	SERPINB3	P29508	390 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	GNA11	P29992	359 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PRDX6	P30041	224 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MATR3	P43243	847 aa	Known RBP eCLIP	2.57	□□□□□ -2	1e-6	■■■□□ 14.6
KTN1-208	ENST00000459737	ASPA	P45381	313 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	HARS2	P49590	506 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	ARL4C	P56559	192 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	BFSP1	Q12934	665 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	GPS2	Q13227	327 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	CEACAM7	Q14002	265 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MYBPC2	Q14324	1141 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	POLD3	Q15054	466 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	MPPE1	Q53F39	396 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	LRCH2	Q5VUJ6	765 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	LPCAT4	Q643R3	524 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TIFAB	Q6ZNK6	161 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	ARHGEF18	Q6ZSZ5	1173 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	DET1	Q7L5Y6	550 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	OTUD6A	Q7L8S5	288 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PHF13	Q86YI8	300 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	KIAA0825	Q8IV33	1275 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	C10orf111	Q8N326	155 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PPM1N	Q8N819	430 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FNDC8	Q8TC99	324 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	SLC44A1	Q8WWI5	657 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	SLC7A3	Q8WY07	619 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	LRCH3	Q96II8	777 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	UIMC1	Q96RL1	719 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	ZNF184	Q99676	751 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	SLC29A1	Q99808	456 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PSD2	Q9BQI7	771 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	NAA50	Q9GZZ1	169 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	LTB4R2	Q9NPC1	389 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FAIM	Q9NVQ4	179 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	NOP53	Q9NZM5	478 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	SUN2	Q9UH99	717 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	SAP30BP	Q9UHR5	308 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	MED16	Q9Y2X0	877 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	AUP1	Q9Y679	476 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	UBE4B	O95155	1302 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737		A0A0B4J293	547 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	TCRBV9S1A1T	A0A576	114 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	BICDL2	A1A5D9	508 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	PDHX	O00330	501 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	KRIT1	O00522	736 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MPHOSPH10	O00566	681 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	DYNC1LI2	O43237	492 aa	Predicted RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	NEBL	O76041	1014 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	AR	P10275	920 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	IDO1	P14902	403 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	NR2F2	P24468	414 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	YY1	P25490	414 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MAN1A1	P33908	653 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	IDUA	P35475	653 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	MTIF2	P46199	727 aa	Known RBP	2.57	□□□□□ -2
KTN1-208	ENST00000459737	KRT17	Q04695	432 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	FZD5	Q13467	585 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	SEMA5A	Q13591	1074 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	RAPGEF1	Q13905	1077 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	NAA25	Q14CX7	972 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	STIL	Q15468	1287 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	CTF1	Q16619	201 aa		2.57	□□□□□ -2
KTN1-208	ENST00000459737	CYS1	Q717R9	158 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms