RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IGSF21Q96ID5 467 aa25.58■■□□□ 1.68
U2AF1-204ENST00000459639 C11orf84Q9BUA3 381 aaPredicted RBP25.58■■□□□ 1.68
U2AF1-204ENST00000459639 DDX23Q9BUQ8 820 aaKnown RBP25.58■■□□□ 1.68
U2AF1-204ENST00000459639 PARD6BQ9BYG5 372 aa25.58■■□□□ 1.68
U2AF1-204ENST00000459639 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.58■■□□□ 1.68
U2AF1-204ENST00000459639 MTUS1Q9ULD2 1270 aa25.58■■□□□ 1.68
U2AF1-204ENST00000459639 MATKP42679 507 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 NDUFV1P49821 464 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 SMC1AQ14683 1233 aaKnown RBP25.57■■□□□ 1.68
U2AF1-204ENST00000459639 ATP13A4Q4VNC1 1196 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 RTP2Q5QGT7 225 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 ZFYVE27Q5T4F4 411 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 KCNT2Q6UVM3 1135 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 RNF168Q8IYW5 571 aaPredicted RBP25.57■■□□□ 1.68
U2AF1-204ENST00000459639 RUBCNQ92622 972 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 FAM149B1Q96BN6 582 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 B3GALT6Q96L58 329 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 SLITRK1Q96PX8 696 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 LRRC1Q9BTT6 524 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 SLITRK6Q9H5Y7 841 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 USP18Q9UMW8 372 aa25.57■■□□□ 1.68
U2AF1-204ENST00000459639 COL4A4P53420 1690 aaPredicted RBP25.56■■□□□ 1.68
U2AF1-204ENST00000459639 TBC1D4O60343 1298 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 TRUB2O95900 331 aaKnown RBP25.56■■□□□ 1.68
U2AF1-204ENST00000459639 IL1R2P27930 398 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 PTPN7P35236 360 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 RABGGTBP53611 331 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 YWHAZP63104 245 aaKnown RBP25.56■■□□□ 1.68
U2AF1-204ENST00000459639 FPGSQ05932 587 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 ODF2Q5BJF6 829 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 FAM117BQ6P1L5 589 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 KLHL7Q8IXQ5 586 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 FAM172AQ8WUF8 416 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 IRGQQ8WZA9 623 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 ZNF558Q96NG5 402 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 RAB21Q9UL25 225 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 PCDHB5Q9Y5E4 795 aa25.56■■□□□ 1.68
U2AF1-204ENST00000459639 ZBED1O96006 694 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 LAG3P18627 525 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 MAGEA11P43364 429 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 ATP11AP98196 1134 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 SMARCB1Q12824 385 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 BTG3Q14201 252 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 CDO1Q16878 200 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 SPOUT1Q5T280 376 aaKnown RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 SH3PXD2AQ5TCZ1 1133 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 VSTM1Q6UX27 236 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 OTOP2Q7RTS6 562 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 ADAT2Q7Z6V5 191 aaKnown RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 TMCO2Q7Z6W1 182 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 CENPIQ92674 756 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 SLC2A13Q96QE2 648 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 PNKPQ96T60 521 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 OSBPL8Q9BZF1 889 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 ZWILCHQ9H900 591 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 NGRNQ9NPE2 291 aaKnown RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 KLHL11Q9NVR0 708 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 ABI2Q9NYB9 513 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 NR2E1Q9Y466 385 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 MYO16Q9Y6X6 1858 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 RALAP11233 206 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 H2AFXP16104 143 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 CYP2F1P24903 491 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 SIX1Q15475 284 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 USP41Q3LFD5 358 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 WDR93Q6P2C0 686 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 C16orf59Q7L2K0 433 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 STRADAQ7RTN6 431 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 DEFB106AQ8N104 65 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 NDRG1Q92597 394 aaKnown RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 RNF25Q96BH1 459 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 DDX47Q9H0S4 455 aaKnown RBP25.55■■□□□ 1.68
U2AF1-204ENST00000459639 POPDC2Q9HBU9 364 aa25.55■■□□□ 1.68
U2AF1-204ENST00000459639 PRPSAP2O60256 369 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 PHF2O75151 1096 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 FGBP02675 491 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 MCM3P25205 808 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 NOS2P35228 1153 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 GRIK1P39086 918 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 CYP1B1Q16678 543 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 PM20D1Q6GTS8 502 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 SPOCD1Q6ZMY3 1216 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 TAS1R1Q7RTX1 841 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 ZDHHC14Q8IZN3 488 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 SLC39A11Q8N1S5 342 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 PRELID2Q8N945 189 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 BADQ92934 168 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 PEBP4Q96S96 227 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 ARGLU1Q9NWB6 273 aaPredicted RBP25.54■■□□□ 1.68
U2AF1-204ENST00000459639 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.54■■□□□ 1.68
U2AF1-204ENST00000459639 PCSK1NQ9UHG2 260 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 STAP1Q9ULZ2 295 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 MRPL42Q9Y6G3 142 aaKnown RBP25.54■■□□□ 1.68
U2AF1-204ENST00000459639 USP3Q9Y6I4 520 aa25.54■■□□□ 1.68
U2AF1-204ENST00000459639 TCRBV7S2A1N4TA0A589 114 aa25.53■■□□□ 1.68
U2AF1-204ENST00000459639 LRRD1A4D1F6 860 aa25.53■■□□□ 1.68
U2AF1-204ENST00000459639 PI4K2BG5E9Z4 385 aa25.53■■□□□ 1.68
U2AF1-204ENST00000459639 TRIM66O15016 1216 aa25.53■■□□□ 1.68
U2AF1-204ENST00000459639 USP17L7P0C7H9 530 aa25.53■■□□□ 1.68
U2AF1-204ENST00000459639 RARAP10276 462 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms