RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LRRD1A4D1F6 860 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RCCD1A6NED2 376 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PIK3R2O00459 728 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CLDN5O00501 218 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RIOK3O14730 519 aaKnown RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 NEBLO76041 1014 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FGF18O76093 207 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CXCL14O95715 111 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FGF19O95750 216 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 GAS8O95995 478 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CALCAP01258 141 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 APOEP02649 317 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 LTFP02788 710 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 KRT1P04264 644 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RB1P06400 928 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZFXP17010 805 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CXCR5P32302 372 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CTNNA1P35221 906 aaKnown RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RFC1P35251 1148 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCK1P35558 622 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MATKP42679 507 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 NDUFV1P49821 464 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 SULT1E1P49888 294 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF135P52742 658 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 DEFB103AP81534 67 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ATP11AP98196 1134 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 DEUP1Q05D60 604 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ADCY1Q08828 1119 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 TFDP2Q14188 446 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RAB30Q15771 203 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CDO1Q16878 200 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PTPN20Q4JDL3 420 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 EFHC2Q5JST6 749 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 TEX35Q5T0J7 233 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ERMARDQ5T6L9 678 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 C8orf74Q6P047 294 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PMF1Q6P1K2 205 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CLEC20AQ6ZU45 233 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 DENND5BQ6ZUT9 1274 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM183BPQ6ZVS7 135 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC26A9Q7LBE3 791 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 GSTA5Q7RTV2 222 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 POLNQ7Z5Q5 900 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MON1AQ86VX9 555 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 XYLT1Q86Y38 959 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 HERC6Q8IVU3 1022 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 TNS4Q8IZW8 715 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FUKQ8N0W3 1084 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 NIPA2Q8N8Q9 360 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 C3orf58Q8NDZ4 430 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 EXD1Q8NHP7 514 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RXFP2Q8WXD0 754 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PIK3R5Q8WYR1 880 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FBXO32Q969P5 355 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 LRRC45Q96CN5 670 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF689Q96CS4 500 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ARHGEF26Q96DR7 871 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MCRS1Q96EZ8 462 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 HES6Q96HZ4 224 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 C8orf48Q96LL4 319 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF512Q96ME7 567 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 TBCBQ99426 244 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 PSMB7Q99436 277 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZSWIM1Q9BR11 485 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CARD6Q9BX69 1037 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CALN1Q9BXU9 219 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 OSBPL7Q9BZF2 842 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPR62Q9BZJ7 368 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 RAB17Q9H0T7 212 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 WDCPQ9H6R7 721 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM204AQ9H8W3 233 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZWILCHQ9H900 591 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC28A3Q9HAS3 691 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CYP4F11Q9HBI6 524 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 HAUS2Q9NVX0 235 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 CACNG4Q9UBN1 327 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 AFF4Q9UHB7 1163 aaKnown RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 METRNQ9UJH8 293 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZMYND8Q9ULU4 1186 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAGED2Q9UNF1 606 aaPredicted RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 UTP11Q9Y3A2 253 aaKnown RBP6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
RNU1-88P-201ENST00000459274 MTCL1Q9Y4B5 1905 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 SYNJ2BP-COX16A0A087WUM0 186 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 UQCRHLA0A096LP55 91 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 TYW5A2RUC4 315 aaKnown RBP6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 F8VP50 259 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 M0QYT0 321 aa6.1□□□□□ -1.43
RNU1-88P-201ENST00000459274 DAB1O75553 588 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms