RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RASA2Q15283 850 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 TSNAXIP1Q2TAA8 658 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 ZC3H12AQ5D1E8 599 aaKnown RBP20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 MROH9Q5TGP6 573 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 XYLT1Q86Y38 959 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 CCDC110Q8TBZ0 833 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 CDHR1Q96JP9 859 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 PIDD1Q9HB75 910 aa20.41■□□□□ 0.86
CNEP1R1-203ENST00000458059 MEI4A8MW99 385 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 B2RBV5 119 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 LUC7L3O95232 432 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 NFICP08651 508 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 POLR2BP30876 1174 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 CDK16Q00536 496 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 CES4AQ5XG92 561 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 OR6B2Q6IFH4 312 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 SCG3Q8WXD2 468 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 STMN2Q93045 179 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 XYLT2Q9H1B5 865 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 VPS11Q9H270 941 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 DCLRE1BQ9H816 532 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 DLDP09622 509 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 HOXC6P09630 235 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 ATP6V1C1P21283 382 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 GMPRP36959 345 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 MAP3K10Q02779 954 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 EN1Q05925 392 aaPredicted RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 LAMTOR4Q0VGL1 99 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 TREML1Q86YW5 311 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 PTCD3Q96EY7 689 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 APOPT1Q96IL0 206 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 HEXIM2Q96MH2 286 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 TM9SF1O15321 606 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 FAM189A1O60320 539 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 ITGB3P05106 788 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 PTPRAP18433 802 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 SLC18A1P54219 525 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 YWHAEP62258 255 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 CHI3L2Q15782 390 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 WASHC2DQ5SRD0 308 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 UNC5BQ8IZJ1 945 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 OXNAD1Q96HP4 312 aaPredicted RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 RILPQ96NA2 401 aa20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 DDX50Q9BQ39 737 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-203ENST00000458059 OGTO15294 1046 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 TNNC2P02585 160 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 F7P08709 466 aaPredicted RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 RBL1P28749 1068 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 PGM1P36871 562 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 BST1Q10588 318 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 KRT81Q14533 505 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZNF667Q5HYK9 610 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 RNF220Q5VTB9 566 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 TRMT10BQ6PF06 316 aaKnown RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 MICALL2Q8IY33 904 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 C12orf29Q8N999 325 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 ACO2Q99798 780 aaKnown RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 DHRS4Q9BTZ2 278 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 CORO1CQ9ULV4 474 aaPredicted RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 APOC4-APOC2K7ER74 178 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 MICAL2O94851 1124 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 APOC2P02655 101 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 CLCN3P51790 818 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 BSPRYQ5W0U4 402 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 TRNP1Q6NT89 227 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 XRRA1Q6P2D8 792 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 SPDYE1Q8NFV5 336 aaPredicted RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 JDP2Q8WYK2 163 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 SMYD2Q9NRG4 433 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZC3H7BQ9UGR2 993 aaKnown RBP20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
CNEP1R1-203ENST00000458059 BAG2O95816 211 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 PIGRP01833 764 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 PDGFRAP16234 1089 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 GRIA1P42261 906 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 ETV4P43268 484 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 CRADDP78560 199 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 TTC13Q8NBP0 860 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 MMP19Q99542 508 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 ELOVL4Q9GZR5 314 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 STRIP2Q9ULQ0 834 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 USP1O94782 785 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 TRUB2O95900 331 aaKnown RBP20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 HMGCRP04035 888 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 SLC44A1Q8WWI5 657 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 SKA1Q96BD8 255 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 TTC1Q99614 292 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 MINDY3Q9H8M7 445 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 SAR1AQ9NR31 198 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 STOML1Q9UBI4 398 aa20.38■□□□□ 0.85
CNEP1R1-203ENST00000458059 ATG7O95352 703 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 CCNG1P51959 295 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 TNFAIP1Q13829 316 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 LRRC36Q1X8D7 754 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 POLNQ7Z5Q5 900 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms