RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ATP5BP06576 529 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 S100A9P06702 114 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 HEXBP07686 556 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 SNRPB2P08579 225 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 RSPH10BP0C881 870 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 SRGAP2BP0DMP2 458 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 HSPA8P11142 646 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 EPB41P11171 864 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 PDHBP11177 359 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 BCL6P41182 706 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ABCG1P45844 678 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 DCAF7P61962 342 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 BEX3Q00994 111 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ACY1Q03154 408 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TNFAIP2Q03169 654 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ADAM9Q13443 819 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ADAM15Q13444 863 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 CUL2Q13617 745 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 IDI1Q13907 227 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 FRG1Q14331 258 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 WDR73Q6P4I2 378 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 B3GNT6Q6ZMB0 384 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 LIMS2Q7Z4I7 341 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 CCDC103Q8IW40 242 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TMCO5AQ8N6Q1 288 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 PPM1NQ8N819 430 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 SMYD1Q8NB12 490 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ST13P5Q8NFI4 369 aaPredicted RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 MOSPD2Q8NHP6 518 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 FAM216AQ8WUB2 273 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TCP11Q8WWU5 503 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 RAPGEF5Q92565 580 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TBC1D5Q92609 795 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 OSBP2Q969R2 916 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 NCLNQ969V3 563 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TUBGCP3Q96CW5 907 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TMEM169Q96HH4 297 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 FAM167AQ96KS9 214 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ZSWIM3Q96MP5 696 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 PSKH2Q96QS6 385 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 EYA3Q99504 573 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TCF25Q9BQ70 676 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 RIOK1Q9BRS2 568 aaKnown RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 TCF7L1Q9HCS4 588 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ZNF277Q9NRM2 450 aaPredicted RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 EMC3Q9P0I2 261 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 AASSQ9UDR5 926 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 MALT1Q9UDY8 824 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 TMEFF2Q9UIK5 374 aaPredicted RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 ST6GALNAC2Q9UJ37 374 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 ZMYND8Q9ULU4 1186 aaPredicted RBP5.76□□□□□ -1.49
VPS41-209ENST00000457055 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
VPS41-209ENST00000457055 MYO3BQ8WXR4 1341 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 KRT87PA6NCN2 255 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 STMND1H3BQB6 276 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 L7N2F9 121 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 NDUFAB1O14561 156 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 MAPK13O15264 365 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 MEFVO15553 781 aaPredicted RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 TBX1O43435 398 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 LAMTOR5O43504 91 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 SULT1B1O43704 296 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 EXTL3O43909 919 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 OPA1O60313 960 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 SLC22A3O75751 556 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 NEBLO76041 1014 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ENDOD1O94919 500 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 CYP1A1P04798 512 aaPredicted RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 ZNF28P17035 718 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 RHCEP18577 417 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 LAG3P18627 525 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 HLA-DPA1P20036 260 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ECI1P42126 302 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 MSH2P43246 934 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 AP3M2P53677 418 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 PLTPP55058 493 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 RHDQ02161 417 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 PPARDQ03181 441 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 TRAP1Q12931 704 aaKnown RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 GRIK3Q13003 919 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 CHRNA2Q15822 529 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ALG11Q2TAA5 492 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 XKR9Q5GH70 373 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ARHGAP11AQ6P4F7 1023 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 LRSAM1Q6UWE0 723 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 RAB11FIP2Q7L804 512 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 KRT27Q7Z3Y8 459 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ZNF804AQ7Z570 1209 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 PLEKHH3Q7Z736 793 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 P3H2Q8IVL5 708 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 SYTL1Q8IYJ3 562 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 RNF139Q8WU17 664 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 ZFAND2BQ8WV99 257 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 PIBF1Q8WXW3 757 aa5.75□□□□□ -1.49
VPS41-209ENST00000457055 DVL3Q92997 716 aaPredicted RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 ZC3H10Q96K80 434 aaKnown RBP5.75□□□□□ -1.49
VPS41-209ENST00000457055 ART5Q96L15 291 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms