RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 C12orf29Q8N999 325 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 SCAMP5Q8TAC9 235 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 RUBCNQ92622 972 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 CYFIP2Q96F07 1278 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 EEF2KMTQ96G04 330 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 CEP63Q96MT8 703 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 SMOQ99835 787 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 P2RY13Q9BPV8 354 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 METTL14Q9HCE5 456 aaKnown RBP18.91■□□□□ 0.62
MSH6-207ENST00000456246 MYH10P35580 1976 aa18.91■□□□□ 0.62
MSH6-207ENST00000456246 DMDP11532 3685 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 ZDHHC11BP0C7U3 371 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 MBL2P11226 248 aaPredicted RBP18.9■□□□□ 0.62
MSH6-207ENST00000456246 CD58P19256 250 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 HOXA6P31267 233 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 MAP3K7CLP57077 242 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 ORC1Q13415 861 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 FSTL4Q6MZW2 842 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 SUMF1Q8NBK3 374 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 ZMIZ2Q8NF64 920 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 SECISBP2LQ93073 1101 aaKnown RBP18.9■□□□□ 0.62
MSH6-207ENST00000456246 CHFRQ96EP1 664 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
MSH6-207ENST00000456246 RNF38Q9H0F5 515 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.9■□□□□ 0.629e-8■■■■■ 51.1
MSH6-207ENST00000456246 TLR8Q9NR97 1041 aaKnown RBP18.9■□□□□ 0.62
MSH6-207ENST00000456246 TBC1D14Q9P2M4 693 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 COQ4Q9Y3A0 265 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 CFAP54Q96N23 3096 aa18.9■□□□□ 0.62
MSH6-207ENST00000456246 BICDL2A1A5D9 508 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 ADORA2BP29275 332 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 CNR2P34972 360 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 PMS1P54277 932 aaKnown RBP18.89■□□□□ 0.61
MSH6-207ENST00000456246 CLEC20AQ6ZU45 233 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 SEMA4DQ92854 862 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 ERCC4Q92889 916 aaPredicted RBP18.89■□□□□ 0.61
MSH6-207ENST00000456246 CD101Q93033 1021 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 OTUB2Q96DC9 234 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 TWNKQ96RR1 684 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 HINFPQ9BQA5 517 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 MAN1B1Q9UKM7 699 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 SMG5Q9UPR3 1016 aaKnown RBP18.89■□□□□ 0.61
MSH6-207ENST00000456246 GPR179Q6PRD1 2367 aa18.89■□□□□ 0.61
MSH6-207ENST00000456246 ZNF292O60281 2723 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 E2F8A0AVK6 867 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 CHURC1-FNTBB4DL54 471 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 COCHO43405 550 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 YWHAEP62258 255 aaKnown RBP18.88■□□□□ 0.61
MSH6-207ENST00000456246 ZXDBP98169 803 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 FILIP1Q7Z7B0 1213 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 NACA2Q9H009 215 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 SMPD4Q9NXE4 827 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 GMIPQ9P107 970 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 CFAP97Q9P2B7 532 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 CHORDC1Q9UHD1 332 aaPredicted RBP18.88■□□□□ 0.61
MSH6-207ENST00000456246 RAB23Q9ULC3 237 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 SCML2Q9UQR0 700 aa18.88■□□□□ 0.61
MSH6-207ENST00000456246 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 K7ESF4 209 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 TLR5O60602 858 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 BEST1O76090 585 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 ADH1CP00326 375 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 GALK1P51570 392 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 CBWD6Q4V339 395 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 CBWD3Q5JTY5 395 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 CBWD5Q5RIA9 395 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 LONP2Q86WA8 852 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 SLC35C1Q96A29 364 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 DUSP16Q9BY84 665 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 LINC00597Q9H2U6 94 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 NCDNQ9UBB6 729 aa18.87■□□□□ 0.61
MSH6-207ENST00000456246 CCDC163A0A0D9SF12 145 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 PMM2O15305 246 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 RNF40O75150 1001 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 EGFP01133 1207 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 TBXAS1P24557 533 aaPredicted RBP18.86■□□□□ 0.61
MSH6-207ENST00000456246 EIF2DP41214 584 aaKnown RBP18.86■□□□□ 0.61
MSH6-207ENST00000456246 PSEN1P49768 467 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 SLC8A3P57103 927 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 GOLGA8FQ08AF8 430 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 GOLGA8DPQ0D2H9 430 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 CETN1Q12798 172 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 MORC3Q14149 939 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 GPR161Q8N6U8 529 aaKnown RBP18.86■□□□□ 0.61
MSH6-207ENST00000456246 TRIML1Q8N9V2 468 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 ACDQ96AP0 544 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 TMEM176AQ96HP8 235 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 HEXIM2Q96MH2 286 aaKnown RBP18.86■□□□□ 0.61
MSH6-207ENST00000456246 CYLDQ9NQC7 956 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 CHMP5Q9NZZ3 219 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 SLC8A2Q9UPR5 921 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 SH3BP1Q9Y3L3 701 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 MYO16Q9Y6X6 1858 aa18.86■□□□□ 0.61
MSH6-207ENST00000456246 HHLA1C9JL84 531 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 GNA14O95837 355 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 CYP17A1P05093 508 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 ACO1P21399 889 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms