RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ALLCQ8N6M5 410 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 TMEM40Q8WWA1 233 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 NKD2Q969F2 451 aaPredicted RBP13.9□□□□□ -0.18
LINC00343-203ENST00000454555 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 MINDY3Q9H8M7 445 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 RNPEPL1Q9HAU8 725 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 PCDH9Q9HC56 1237 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
LINC00343-203ENST00000454555 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 LNPEPQ9UIQ6 1025 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 L3MBTL1Q9Y468 752 aa13.9□□□□□ -0.18
LINC00343-203ENST00000454555 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 TM9SF1O15321 606 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 PIGRP01833 764 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
LINC00343-203ENST00000454555 FOXN2P32314 431 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 AP3M2P53677 418 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 CUL2Q13617 745 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 TRIP13Q15645 432 aaPredicted RBP13.89□□□□□ -0.19
LINC00343-203ENST00000454555 MAPK6Q16659 721 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 FBXO47Q5MNV8 452 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
LINC00343-203ENST00000454555 BZW1Q7L1Q6 419 aaKnown RBP13.89□□□□□ -0.19
LINC00343-203ENST00000454555 TAS1R3Q7RTX0 852 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 ENDOVQ8N8Q3 282 aaKnown RBP13.89□□□□□ -0.19
LINC00343-203ENST00000454555 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 C9orf72Q96LT7 481 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 SAYSD1Q9NPB0 183 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 STK38LQ9Y2H1 464 aa13.89□□□□□ -0.19
LINC00343-203ENST00000454555 TRIM43BA6NCK2 446 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ACKR2O00590 384 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 C2CD2LO14523 706 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 DIAPH2O60879 1101 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TIMP1P01033 207 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 HLA-DRAP01903 254 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 KRT15P19012 456 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ACO1P21399 889 aaKnown RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 CALB2P22676 271 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 GNA15P30679 374 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 EFHC2Q5JST6 749 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 NIPA2Q8N8Q9 360 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TTC13Q8NBP0 860 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TRIM43Q96BQ3 446 aaPredicted RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 THOC1Q96FV9 657 aaKnown RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 BICD1Q96G01 975 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 MYLK2Q9H1R3 596 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TLE6Q9H808 572 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TOPORSQ9NS56 1045 aaPredicted RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 CORO1CQ9ULV4 474 aaPredicted RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TYROBPO43914 113 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 PRKCBP05771 671 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 GCAP28676 217 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 VPS41P49754 854 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 VCPP55072 806 aaKnown RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 PIGHQ14442 188 aaPredicted RBP13.88□□□□□ -0.19
LINC00343-203ENST00000454555 LPIN1Q14693 890 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 AMHR2Q16671 573 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 KIF2BQ8N4N8 673 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ERP27Q96DN0 273 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 ZNF148Q9UQR1 794 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 LRRC42Q9Y546 428 aa13.88□□□□□ -0.19
LINC00343-203ENST00000454555 SIP14410 1827 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 GPR182O15218 404 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 ABCB7O75027 752 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
LINC00343-203ENST00000454555 MMP8P22894 467 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 CYP2C18P33260 490 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 RFC2P35250 354 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 LIG4P49917 911 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 ARSEP51690 589 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 GEMIN4P57678 1058 aaKnown RBP13.87□□□□□ -0.19
LINC00343-203ENST00000454555 TAS2R40P59535 323 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 GPNMBQ14956 572 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 TFDP3Q5H9I0 405 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
LINC00343-203ENST00000454555 HHATQ5VTY9 493 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 ERICH1Q86X53 443 aa13.87□□□□□ -0.19
LINC00343-203ENST00000454555 ATP11CQ8NB49 1132 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms