RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 KCTD13Q8WZ19 329 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 SECISBP2LQ93073 1101 aaKnown RBP29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 PLA2G2FQ9BZM2 168 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 GMIPQ9P107 970 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 PI4K2BG5E9Z4 385 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 CFHP08603 1231 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 VIPR2P41587 438 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 GPD2P43304 727 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 UBASH3AP57075 661 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 PMF1Q6P1K2 205 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 DENND1BQ6P3S1 775 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 CCDC186Q7Z3E2 898 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 E2F7Q96AV8 911 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 SLC22A12Q96S37 553 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 TRPC7Q9HCX4 862 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 PCDHGC3Q9UN70 934 aa29.49■■■□□ 2.31
SMARCC1-203ENST00000454240 TRIOO75962 3097 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 PRAMEF12O95522 483 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 ALADP13716 330 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 AVPR1AP37288 418 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 PGFP49763 221 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 GPIHBP1Q8IV16 184 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 RNF214Q8ND24 703 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 RSPRY1Q96DX4 576 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 CYP2S1Q96SQ9 504 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 SMOC2Q9H3U7 446 aa29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 TLR8Q9NR97 1041 aaKnown RBP29.48■■■□□ 2.31
SMARCC1-203ENST00000454240 TRAV19A0A0A6YYK7 116 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 GABBR2O75899 941 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 ABL1P00519 1130 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 OAS1P00973 400 aaKnown RBP29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 HDCP19113 662 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 TKTL1P51854 596 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 ZXDAP98168 799 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 PM20D1Q6GTS8 502 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 VITQ6UXI7 678 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 UBALD2Q8IYN6 164 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 ARL14EPQ8N8R7 260 aaPredicted RBP29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 HSFY1Q96LI6 401 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 SPAG5Q96R06 1193 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 SMG9Q9H0W8 520 aaKnown RBP29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 LRRC4Q9HBW1 653 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 OBP2AQ9NY56 170 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 DUSP12Q9UNI6 340 aa29.47■■■□□ 2.31
SMARCC1-203ENST00000454240 HEPACAM2A8MVW5 462 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 OLFM2O95897 454 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 USP17L7P0C7H9 530 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 CYP11B1P15538 503 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 SOX5P35711 763 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 RPL34P49207 117 aaKnown RBP29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 TUBP50607 506 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 PDE6CP51160 858 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 ZNF268Q14587 947 aaPredicted RBP29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 MFSD6LQ8IWD5 586 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 EDAQ92838 391 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 USP13Q92995 863 aaPredicted RBP29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 LRRC3BQ96PB8 259 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 RNF38Q9H0F5 515 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 TDP1Q9NUW8 608 aa29.46■■■□□ 2.31
SMARCC1-203ENST00000454240 NARSO43776 548 aaKnown RBP29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 PBX1P40424 430 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 STAT1P42224 750 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 RGS7P49802 495 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 CELF5Q8N6W0 485 aaKnown RBP29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 STK32AQ8WU08 396 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 ULBP1Q9BZM6 244 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 LHX5Q9H2C1 402 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 NMUR1Q9HB89 426 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 OSER1Q9NX31 292 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 IFNKQ9P0W0 207 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 CCL26Q9Y258 94 aa29.45■■■□□ 2.31
SMARCC1-203ENST00000454240 GFPT2O94808 682 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 ZBED1O96006 694 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 CKMP06732 381 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 SRFP11831 508 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 ADIGQ0VDE8 80 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 HECTD3Q5T447 861 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 SCD5Q86SK9 330 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 SCML4Q8N228 414 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 WDTC1Q8N5D0 677 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 DEPDC1BQ8WUY9 529 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 DDX1Q92499 740 aaKnown RBP29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 KIF9Q9HAQ2 790 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 CYTH4Q9UIA0 394 aa29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 KIF26AQ9ULI4 1882 aaPredicted RBP29.44■■■□□ 2.3
SMARCC1-203ENST00000454240 A0A1W2PQH9 124 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 DPYSL4O14531 572 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 PSMC3P17980 439 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 KRT9P35527 623 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 PSEN1P49768 467 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 SLC7A9P82251 487 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 BHLHA9Q7RTU4 235 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 CACNA2D4Q7Z3S7 1137 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 EPS8L1Q8TE68 723 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 SLC4A5Q9BY07 1137 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 EPHX3Q9H6B9 360 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 CCSER2Q9H7U1 834 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 CYLDQ9NQC7 956 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 CNGB3Q9NQW8 809 aa29.43■■■□□ 2.3
SMARCC1-203ENST00000454240 SLC2A4RGQ9NR83 387 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms