RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GNA15P30679 374 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 STAT1P42224 750 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 WDR4P57081 412 aaKnown RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 SNX16P57768 344 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 POLR2FP61218 127 aaKnown RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 RBM10P98175 930 aaKnown RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 DRAP1Q14919 205 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 PABPC1LQ4VXU2 614 aaKnown RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ZNF394Q53GI3 561 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 DENND5BQ6ZUT9 1274 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 PDZD4Q76G19 769 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ZNF677Q86XU0 584 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 SCN4BQ8IWT1 228 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 PDZD8Q8NEN9 1154 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ZNF397Q8NF99 534 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 OVCA2Q8WZ82 227 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 KAT5Q92993 513 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 NAP1L5Q96NT1 182 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 DUSP16Q9BY84 665 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 ZNF518BQ9C0D4 1074 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 FBXO44Q9H4M3 255 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 FAM49BQ9NUQ9 324 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 IFNKQ9P0W0 207 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 USP15Q9Y4E8 981 aaPredicted RBP9.21□□□□□ -0.94
COL28A1-205ENST00000453441 CEP83Q9Y592 693 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 NCANO14594 1321 aa9.21□□□□□ -0.94
COL28A1-205ENST00000453441 PATJQ8NI35 1801 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 DENND4AQ7Z401 1863 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 SLC38A8A6NNN8 435 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 F8VP50 259 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 FOXN3O00409 490 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 XPO1O14980 1071 aaKnown RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TEX33O43247 280 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TPM1P09493 284 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TIMP2P16035 220 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 FERP16591 822 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 FSHRP23945 695 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 ADORA2BP29275 332 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 SOX5P35711 763 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PBX1P40424 430 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 USP8P40818 1118 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PLA2G4AP47712 749 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PDE6CP51160 858 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 JAM2P57087 298 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 BST2Q10589 180 aaKnown RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 ORC1Q13415 861 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 GOLGA7BQ2TAP0 167 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 ARHGAP15Q53QZ3 475 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PPP1R2P3Q6NXS1 205 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 GJB7Q6PEY0 223 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 CLEC20AQ6ZU45 233 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PAQR9Q6ZVX9 377 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 OTOP3Q7RTS5 596 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 DNAJB7Q7Z6W7 309 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TTC9BQ8N6N2 239 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 C12orf76Q8N812 135 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 C12orf29Q8N999 325 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 ACSF2Q96CM8 615 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 NOX5Q96PH1 765 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 SLITRK1Q96PX8 696 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TTLL2Q9BWV7 592 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PHF7Q9BWX1 381 aaPredicted RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 GMPR2Q9P2T1 348 aaKnown RBP9.2□□□□□ -0.94
COL28A1-205ENST00000453441 TSPAN16Q9UKR8 245 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 NR2E1Q9Y466 385 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 C2orf16Q68DN1 1984 aa9.2□□□□□ -0.94
COL28A1-205ENST00000453441 FAM92AA1XBS5 289 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
COL28A1-205ENST00000453441 CLDN5O00501 218 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 CYP26A1O43174 497 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 THAP12O43422 761 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
COL28A1-205ENST00000453441 RHOP08100 348 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 KRT9P35527 623 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 DDR2Q16832 855 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 SPECC1LQ69YQ0 1117 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 TRIM72Q6ZMU5 477 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 GRASPQ7Z6J2 395 aaPredicted RBP9.19□□□□□ -0.94
COL28A1-205ENST00000453441 CCDC116Q8IYX3 515 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 SCML4Q8N228 414 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 MSANTD4Q8NCY6 345 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.19□□□□□ -0.94
COL28A1-205ENST00000453441 ZNF606Q8WXB4 792 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 KCTD13Q8WZ19 329 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 SYN2Q92777 582 aaPredicted RBP9.19□□□□□ -0.94
COL28A1-205ENST00000453441 MRFAP1L1Q96HT8 127 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 HSFY1Q96LI6 401 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 ASB2Q96Q27 587 aa9.19□□□□□ -0.94
COL28A1-205ENST00000453441 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms