RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PAEPP09466 180 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 RPS9P46781 194 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 SOX9P48436 509 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 NHLH1Q02575 133 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 BHLHA9Q7RTU4 235 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 YAF2Q8IY57 180 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 LINC00597Q9H2U6 94 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 FBXO44Q9H4M3 255 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 NMUR1Q9HB89 426 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 SIX2Q9NPC8 291 aa17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 THG1LQ9NWX6 298 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-205ENST00000452128 DMDP11532 3685 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 LEFTY2O00292 366 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 TULP2O00295 520 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CKMP06732 381 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CHRNB1P11230 501 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 VDRP11473 427 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 ARSAP15289 507 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 SLC9A1P19634 815 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CTHP32929 405 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 PLA2G5P39877 138 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 YWHAEP62258 255 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CETN1Q12798 172 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 MTF1Q14872 753 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CNGA2Q16280 664 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 EML3Q32P44 896 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 SMYD5Q6GMV2 418 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 PM20D1Q6GTS8 502 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 LCLAT1Q6UWP7 414 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 RALGPS2Q86X27 583 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 ENOX1Q8TC92 643 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 MSANTD3Q96H12 275 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CCSER2Q9H7U1 834 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 SAMSN1Q9NSI8 373 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
SCAMP4-205ENST00000452128 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 STK25O00506 426 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PON1P27169 355 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PDE6CP51160 858 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PTPN5P54829 565 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 APBA1Q02410 837 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 RUNX3Q13761 415 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PDGFRLQ15198 375 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 ITPRIPL2Q3MIP1 535 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 HECTD3Q5T447 861 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 TRIM65Q6PJ69 517 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 TMEM270Q6UE05 265 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PIGZQ86VD9 579 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 PPM1KQ8N3J5 372 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 SLC35F5Q8WV83 523 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 FAM3CQ92520 227 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 WBP2Q969T9 261 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 CRACR2AQ9BSW2 395 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 EBF3Q9H4W6 596 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 CPQQ9Y646 472 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 MYO15AQ9UKN7 3530 aa17■□□□□ 0.31
SCAMP4-205ENST00000452128 BECN2A8MW95 431 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 CYP26A1O43174 497 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 TBX18O95935 607 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 CALCAP01258 141 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 TRIM21P19474 475 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 RPL34P49207 117 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 PDE4CQ08493 712 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 GAS6Q14393 721 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 CDKAL1Q5VV42 579 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 KLHDC10Q6PID8 442 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 ADGRG2Q8IZP9 1017 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 CSGALNACT1Q8TDX6 532 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 FBRSL1Q9HCM7 1045 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 DACH1Q9UI36 760 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 TSPAN16Q9UKR8 245 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 MRPS17Q9Y2R5 130 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 PCDHB4Q9Y5E5 795 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 WNT6Q9Y6F9 365 aa16.99■□□□□ 0.31
SCAMP4-205ENST00000452128 A0A1W2PQH9 124 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 TRDMT1O14717 391 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 XPO1O14980 1071 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 MBD3O95983 291 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 MAGEA9P43362 315 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 PLA2G4AP47712 749 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 KCNMA1Q12791 1236 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 GOLGA7BQ2TAP0 167 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 C1orf228Q6PIY5 440 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 GBP6Q6ZN66 633 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms