RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PP2D1A8MPX8 630 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ERVV-2B6SEH9 535 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SMIM22K7EJ46 135 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PGRMC1O00264 195 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PES1O00541 588 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PLSCR1O15162 318 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 DAPK3O43293 454 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SUSD5O60279 629 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 DIAPH2O60879 1101 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF623O75123 536 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CAND2O75155 1236 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FLOT1O75955 427 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 LUC7L3O95232 432 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FGFR1OPO95684 399 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLPIP03973 132 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 KRT16P08779 473 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FAM228BP0C875 321 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FCER1AP12319 257 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 GRIA2P42262 883 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 GFRA1P56159 465 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ROR2Q01974 943 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC15Q0P6D6 951 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ACVR2BQ13705 512 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PDIA5Q14554 519 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RBBP5Q15291 538 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PUM3Q15397 648 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RPS6KA1Q15418 735 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CNGA2Q16280 664 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC35G1Q2M3R5 365 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PARP6Q2NL67 630 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 TBC1D25Q3MII6 688 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 KRT71Q3SY84 523 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC9C1Q4G0N8 1177 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC38Q502W7 563 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANKRD20A2Q5SQ80 823 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FAM83BQ5T0W9 1011 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ACBD5Q5T8D3 534 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANKRD20A1Q5TYW2 823 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SFMBT2Q5VUG0 894 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANKRD20A3Q5VUR7 823 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLFN13Q68D06 897 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANO7Q6IWH7 933 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PKN3Q6P5Z2 889 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZDHHC24Q6UX98 284 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 IRF2BP2Q7Z5L9 587 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CPLX4Q7Z7G2 160 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 TBC1D1Q86TI0 1168 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 HOOK3Q86VS8 718 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ERICH1Q86X53 443 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 KLHL7Q8IXQ5 586 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 BLIDQ8IZY5 108 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 GALNT15Q8N3T1 639 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 KLHL36Q8N4N3 616 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 METTL13Q8N6R0 699 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ENDOVQ8N8Q3 282 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 GBP7Q8N8V2 638 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 NUDT10Q8NFP7 164 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 DNERQ8NFT8 737 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MDM1Q8TC05 714 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PARD3BQ8TEW8 1205 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 NUDT11Q96G61 164 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 HES6Q96HZ4 224 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 TMEM209Q96SK2 561 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RIOK1Q9BRS2 568 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PACSIN1Q9BY11 444 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MTFR1LQ9H019 292 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RAB17Q9H0T7 212 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PABPC3Q9H361 631 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 GREM2Q9H772 168 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RIC8AQ9NPQ8 531 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 FAM207AQ9NSI2 230 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 BLOC1S4Q9NUP1 217 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ABCF3Q9NUQ8 709 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ACTR10Q9NZ32 417 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MYOTQ9UBF9 498 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PNMA2Q9UL42 364 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PCDHA6Q9UN73 950 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RPL26L1Q9UNX3 145 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 NOC2LQ9Y3T9 749 aaKnown RBP4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PCDHA8Q9Y5H6 950 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 PCDHA3Q9Y5H8 950 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 HS3ST3A1Q9Y663 406 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 C10orf71Q711Q0 1435 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 TOGARAM1Q9Y4F4 1720 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC88AQ3V6T2 1871 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF804BA4D1E1 1349 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MROH7Q68CQ1 1323 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MROH5Q6ZUA9 1318 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 RPTORQ8N122 1335 aa4.43□□□□□ -1.7
HMGB3P22-202ENST00000451823 MYH4Q9Y623 1939 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 SCN7AQ01118 1682 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 hCG_1642624A0A1W2PR95 340 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 MYMKA6NI61 221 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 SIGLEC16A6NMB1 481 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 B2RBV5 119 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 KIAA0391O15091 583 aaKnown RBP4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 ECE2O60344 883 aa4.42□□□□□ -1.7
HMGB3P22-202ENST00000451823 CTNND1O60716 968 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms