RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PTPN7P35236 360 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 GTF2A2P52657 109 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 SCYL2Q6P3W7 929 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 SPATS2Q86XZ4 545 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
COL27A1-202ENST00000451716 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 C2CD2Q9Y426 696 aa12.63□□□□□ -0.39
COL27A1-202ENST00000451716 GCAP28676 217 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 GABRB2P47870 512 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 CDH6P55285 790 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 INCA1Q0VD86 236 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 HIC1Q14526 733 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 MSS51Q4VC12 460 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 WLSQ5T9L3 541 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 BBS12Q6ZW61 710 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 C7orf31Q8N865 590 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 RSAD2Q8WXG1 361 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 MIS12Q9H081 205 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 PCDH9Q9HC56 1237 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 TCP11X1B4DZS4 312 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 CDH16O75309 829 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 SPAG7O75391 227 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 RPL22P35268 128 aaKnown RBP12.62□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-202ENST00000451716 GRB14Q14449 540 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 MORF4L2Q15014 288 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 C16orf87Q6PH81 154 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 SESTD1Q86VW0 696 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 CCHCR1Q8TD31 782 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 PRCCQ92733 491 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-202ENST00000451716 ADAMTS10Q9H324 1103 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
COL27A1-202ENST00000451716 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 GGT7Q9UJ14 662 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 COL1A2P08123 1366 aa12.62□□□□□ -0.39
COL27A1-202ENST00000451716 C2CD4BA6NLJ0 364 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 RASA4BC9J798 803 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 DNM1LO00429 736 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 RASA4O43374 803 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 PDGFRBP09619 1106 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 GPD1P21695 349 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 GRM5P41594 1212 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 FNBP1LQ5T0N5 605 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 C1orf228Q6PIY5 440 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 CYP4V2Q6ZWL3 525 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 CMASQ8NFW8 434 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 SPATA18Q8TC71 538 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 CPT1BQ92523 772 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC77Q9BR77 488 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 PHACTR1Q9C0D0 580 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 MMADHCQ9H3L0 296 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 FGFR1OP2Q9NVK5 253 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 RBP3P10745 1247 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 TFE3P19532 575 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 SSTR1P30872 391 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 STAT4Q14765 748 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 EFTUD2Q15029 972 aaKnown RBP eCLIP12.61□□□□□ -0.391e-7■■■■■ 27.4
COL27A1-202ENST00000451716 PLEKHH3Q7Z736 793 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 GTF3C2Q8WUA4 911 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-202ENST00000451716 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
COL27A1-202ENST00000451716 GPR32O75388 356 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 TCEA3O75764 348 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 GABBR2O75899 941 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 SMIM10L2AP0DMW4 78 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 SMIM10L2BP0DMW5 78 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ATP5DP30049 168 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 BASP1P80723 227 aaKnown RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 HIF1AQ16665 826 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 YTHDF3Q7Z739 585 aaKnown RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF467Q7Z7K2 595 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 DNAJB3Q8WWF6 145 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 EPAS1Q99814 870 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 MAGEB5Q9BZ81 275 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 GOLGA2P5Q9HBQ8 144 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 RECQL4O94761 1208 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 TMEM63AO94886 807 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF24P17028 368 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 SCNN1BP51168 640 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ACTN3Q08043 901 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms