RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 KRT81Q14533 505 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 CCDC62Q6P9F0 684 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 XYLT2Q9H1B5 865 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 CPSF3Q9UKF6 684 aaKnown RBP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 TRIM49D1C9J1S8 452 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 COPEO14579 308 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 KCNN4O15554 427 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 CCDC22O60826 627 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 ESRRAP11474 423 aaPredicted RBP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 KCNA3P22001 575 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 EFNA5P52803 228 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 RCN1Q15293 331 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 ALKBH8Q96BT7 664 aaKnown RBP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 PEBP4Q96S96 227 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 DHRS4Q9BTZ2 278 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 VPS11Q9H270 941 aa11.8□□□□□ -0.52
SYVN1-204ENST00000449943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.8□□□□□ -0.52
SYVN1-204ENST00000449943 SMNDC1O75940 238 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■□□□ 13.7
SYVN1-204ENST00000449943 KRT36O76013 467 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 MICAL2O94851 1124 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 RCN2Q14257 317 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 WASHC2DQ5SRD0 308 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 OR6B2Q6IFH4 312 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 CATSPERGQ6ZRH7 1159 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 RINLQ6ZS11 566 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 FBXO41Q8TF61 875 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 SSU72Q9NP77 194 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 MYH9P35579 1960 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 F5H423 210 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 MAFO75444 373 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ATG7O95352 703 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ITGB3P05106 788 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 NFICP08651 508 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 CDH5P33151 784 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 RASA2Q15283 850 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 SMAD1Q15797 465 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ATF7IP2Q5U623 682 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 EP400NLQ6ZTU2 488 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 NSL1Q96IY1 281 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 BTBD10Q9BSF8 475 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 TRUB2O95900 331 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 SERPINB4P48594 390 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 IRX4P78413 519 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 LMNTD2Q8IXW0 634 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 SAR1AQ9NR31 198 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 E7ESA3 106 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 RGS7P49802 495 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 CDK16Q00536 496 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 BLMHQ13867 455 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 TARBP2Q15633 366 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 CDHR3Q6ZTQ4 885 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 ARMC2Q8NEN0 867 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 RPF1Q9H9Y2 349 aaKnown RBP11.79□□□□□ -0.52
SYVN1-204ENST00000449943 HESX1Q9UBX0 185 aa11.79□□□□□ -0.52
SYVN1-204ENST00000449943 E5RJQ4 531 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 APRTP07741 180 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PTPN11Q06124 597 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 MPZL3Q6UWV2 235 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 SLC44A1Q8WWI5 657 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PIWIL1Q96J94 861 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 SRPK1Q96SB4 655 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ELOVL4Q9GZR5 314 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ZNF395Q9H8N7 513 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 MAD1L1Q9Y6D9 718 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 UGT1A9O60656 530 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PDGFRAP16234 1089 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 CLCN3P51790 818 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 TMPRSS15P98073 1019 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 STMN2Q93045 179 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 RSAD1Q9HA92 442 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 UGT1A7Q9HAW7 530 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 UGT1A10Q9HAW8 530 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 UGT1A8Q9HAW9 530 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ASNSD1Q9NWL6 643 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 CXorf49A8MYA2 514 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 I3L4J1 428 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 FCHO1O14526 889 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 GSC2O15499 205 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PRPSAP2O60256 369 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 CCNG1P51959 295 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 ZNF398Q8TD17 642 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
SYVN1-204ENST00000449943 PPARGC1AQ9UBK2 798 aaKnown RBP11.78□□□□□ -0.52
SYVN1-204ENST00000449943 FETUBQ9UGM5 382 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms