RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 PI4KBQ9UBF8 816 aa12□□□□□ -0.49
SHANK2-211ENST00000449833 VPS4AQ9UN37 437 aa12□□□□□ -0.49
SHANK2-211ENST00000449833 USP27XA6NNY8 438 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 RALAP11233 206 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 MYL12AP19105 171 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 RNF19BQ6ZMZ0 732 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 BNC2Q6ZN30 1099 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SLC35G2Q8TBE7 412 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PPP1R16BQ96T49 567 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 FRMD8Q9BZ67 464 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 MKLN1Q9UL63 735 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 OR14I1A6ND48 311 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SMAD5Q99717 465 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 THUMPD3Q9BV44 507 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 NOTOA8MTQ0 251 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 IFNA7P01567 189 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 CHI3L1P36222 383 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 FEN1P39748 380 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PWP1Q13610 501 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SPIDRQ14159 915 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 ERMAPQ96PL5 475 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 RAPGEFL1Q9UHV5 662 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 UTYO14607 1347 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SRRM3A6NNA2 597 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 E9PBE3 544 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 HAT1O14929 419 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 TM9SF1O15321 606 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 CSPG5O95196 566 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PDHBP11177 359 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 HOXB6P17509 224 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 HOXA13P31271 388 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SLC18A3Q16572 532 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 DUOXA2Q1HG44 320 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PHF11Q9UIL8 331 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 PSME3P61289 254 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 POU4F1Q01851 419 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 HMBOX1Q6NT76 420 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 RMND5AQ9H871 391 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SNX4O95219 450 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 SEC24AO95486 1093 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 AKIRIN2Q53H80 203 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 TWF2Q6IBS0 349 aaKnown RBP11.99□□□□□ -0.49
SHANK2-211ENST00000449833 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 FAM172AQ8WUF8 416 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 DNAJC7Q99615 494 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 RERGLQ9H628 205 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 ZNF222Q9UK12 451 aa11.99□□□□□ -0.49
SHANK2-211ENST00000449833 ATP6V1C1P21283 382 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 FASP25445 335 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 CCZ1BP86790 482 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 CCZ1P86791 482 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 TRAF2Q12933 501 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 AGPAT1Q99943 283 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SAR1AQ9NR31 198 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 TAGLN3Q9UI15 199 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SHANK2Q9UPX8 1470 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 M0QX08 132 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 AKT1P31749 480 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SOX11P35716 441 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SKIV2L2P42285 1042 aaKnown RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 TMC4Q7Z404 712 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 PVALEFA0A1B0GWK0 134 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 DENND3A2RUS2 1198 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 CCNI2Q6ZMN8 369 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 NDNQ99608 321 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 PAK5Q9P286 719 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 KPNA5O15131 536 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SNAP91O60641 907 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 RPS6KA5O75582 802 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SERPINB5P36952 375 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SMCO1Q147U7 214 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SCARA3Q6AZY7 606 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 PPP1R18Q6NYC8 613 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 EID3Q8N140 333 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 EIF3LQ9Y262 564 aaKnown RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 RPS7P62081 194 aaKnown RBP11.98□□□□□ -0.49
SHANK2-211ENST00000449833 TSPAN14Q8NG11 270 aa11.98□□□□□ -0.49
SHANK2-211ENST00000449833 PNPT1Q8TCS8 783 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms