RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MYO1FO00160 1098 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 GRM6O15303 877 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 CXCL14O95715 111 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 ZBED1O96006 694 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 ADH1AP07327 375 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 CDR1P51861 262 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 DAOAP59103 153 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 SMAD3P84022 425 aaKnown RBP20.24■□□□□ 0.83
RPS28-202ENST00000449223 EFHC1Q5JVL4 640 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 DCUN1D2Q6PH85 259 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 LILRA6Q6PI73 481 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 BHLHA9Q7RTU4 235 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 PHLDB2Q86SQ0 1253 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 TCEAL8Q8IYN2 117 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 KLHL5Q96PQ7 755 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 TRIM7Q9C029 511 aa20.24■□□□□ 0.83
RPS28-202ENST00000449223 METTL5Q9NRN9 209 aaKnown RBP20.24■□□□□ 0.83
RPS28-202ENST00000449223 ATG2AQ2TAZ0 1938 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 GOLGA8SH3BPF8 625 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 PIK3R2O00459 728 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 RFC1P35251 1148 aaPredicted RBP20.23■□□□□ 0.83
RPS28-202ENST00000449223 DAAM2Q86T65 1068 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 SCN4BQ8IWT1 228 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 NUP93Q8N1F7 819 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 ULBP1Q9BZM6 244 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 LMAN2LQ9H0V9 348 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 NKX2-4Q9H2Z4 354 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 IP6K2Q9UHH9 426 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 MTUS1Q9ULD2 1270 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 MTCL1Q9Y4B5 1905 aaKnown RBP20.23■□□□□ 0.83
RPS28-202ENST00000449223 MYO16Q9Y6X6 1858 aa20.23■□□□□ 0.83
RPS28-202ENST00000449223 C2CD4BA6NLJ0 364 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 HSF2BPO75031 334 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 PROSCO94903 275 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 GJB6O95452 261 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 ZNF252P-AS1Q0IIN9 211 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 GPM6BQ13491 265 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 ACAP1Q15027 740 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 DDR2Q16832 855 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 MGAT5BQ3V5L5 792 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 PPP2R2DQ66LE6 453 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 BEND5Q7L4P6 421 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 JOSD2Q8TAC2 188 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 CLEC4CQ8WTT0 213 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
RPS28-202ENST00000449223 FBXO44Q9H4M3 255 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SLC27A5Q9Y2P5 690 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 ALG6Q9Y672 507 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 DPYSL4O14531 572 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 RTN3O95197 1032 aaPredicted RBP20.22■□□□□ 0.83
RPS28-202ENST00000449223 SEC24AO95486 1093 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 ATF6P18850 670 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SLC1A1P43005 524 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 ZNF143P52747 638 aaPredicted RBP20.22■□□□□ 0.83
RPS28-202ENST00000449223 PIGHQ14442 188 aaPredicted RBP20.22■□□□□ 0.83
RPS28-202ENST00000449223 MEI1Q5TIA1 1274 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SYT10Q6XYQ8 523 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 DENND5BQ6ZUT9 1274 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 RTL10Q7L3V2 364 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 NT5DC3Q86UY8 548 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 TTLL2Q9BWV7 592 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 DNAI1Q9UI46 699 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 SCML2Q9UQR0 700 aa20.22■□□□□ 0.83
RPS28-202ENST00000449223 TGM5O43548 720 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 FLT3P36888 993 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 GPR15P49685 360 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 YWHAZP63104 245 aaKnown RBP20.21■□□□□ 0.83
RPS28-202ENST00000449223 OGDHQ02218 1023 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 MESDQ14696 234 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 TAF5Q15542 800 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 PLPP4Q5VZY2 271 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 TRNP1Q6NT89 227 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 SCAMP5Q8TAC9 235 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 BTBD6Q96KE9 485 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 SLC2A13Q96QE2 648 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 TRIM62Q9BVG3 475 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 FBXW11Q9UKB1 542 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 YIPF1Q9Y548 306 aa20.21■□□□□ 0.83
RPS28-202ENST00000449223 A0A1W2PPC1 479 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 CTAGE9A4FU28 777 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 DAB1O75553 588 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 PTPN9P43378 593 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 KIF18AQ8NI77 898 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
RPS28-202ENST00000449223 CD101Q93033 1021 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 NT5C3BQ969T7 300 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 NAPGQ99747 312 aaPredicted RBP20.2■□□□□ 0.82
RPS28-202ENST00000449223 CNPY3Q9BT09 278 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 TLR10Q9BXR5 811 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 CYP4F11Q9HBI6 524 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 POPDC2Q9HBU9 364 aa20.2■□□□□ 0.82
RPS28-202ENST00000449223 YJEFN3A6XGL0 299 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 E7ENQ6 273 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 SOAT2O75908 522 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 LTFP02788 710 aa20.19■□□□□ 0.82
RPS28-202ENST00000449223 GPD1P21695 349 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms