RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 DVL3Q92997 716 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 SNX21Q969T3 373 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 MRPL38Q96DV4 380 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 TMEM117Q9H0C3 514 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 WRAP73Q9P2S5 460 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 KCNG1Q9UIX4 513 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 ST6GALNAC2Q9UJ37 374 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
SMARCE1-206ENST00000447024 PHLPP2Q6ZVD8 1323 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 A0A087WZ62 844 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 MGEA5O60502 916 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 LPXNO60711 386 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 DTNBO60941 627 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 TECP42680 631 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 TOB1P50616 345 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 ITGA1P56199 1179 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 ATP2C1P98194 919 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 UBE3AQ05086 875 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 PPP2R5AQ15172 486 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 PRR31Q5SQ13 230 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 KRT79Q5XKE5 535 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 CATSPER4Q7RTX7 472 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 TMCO2Q7Z6W1 182 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 ECHDC2Q86YB7 292 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 TXNDC5Q8NBS9 432 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 CNNM3Q8NE01 707 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 PPP2R3CQ969Q6 453 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 AK8Q96MA6 479 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 FDXACB1Q9BRP7 624 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 MRPL9Q9BYD2 267 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 NT5C3AQ9H0P0 336 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 IFT122Q9HBG6 1241 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 THEGQ9P2T0 379 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 STK39Q9UEW8 545 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 LRWD1Q9UFC0 647 aa8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-206ENST00000447024 NLRC5Q86WI3 1866 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 ARID2Q68CP9 1835 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 ARHGEF35A5YM69 484 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 TMEM150BA6NC51 233 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 EPOPA6NHQ4 379 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 LINC00271P0C7V0 271 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 PLS3P13797 630 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 LAG3P18627 525 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 CYP11B2P19099 503 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 CTNNB1P35222 781 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 PPM1AP35813 382 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 ARL2P36404 184 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 CCT6AP40227 531 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 GIPRP48546 466 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 PTENP60484 403 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 MRPS5P82675 430 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 DRP2Q13474 957 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 GPM6BQ13491 265 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 HYIQ5T013 277 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 GLB1LQ6UWU2 654 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 LIMS2Q7Z4I7 341 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 ZNF513Q8N8E2 541 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 RNF149Q8NC42 400 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 KIFAP3Q92845 792 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 PGBD4Q96DM1 585 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 NLRP4Q96MN2 994 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 C17orf80Q9BSJ5 609 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 TIPINQ9BVW5 301 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 C2orf40Q9H1Z8 148 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 C17orf75Q9HAS0 396 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 AGPAT5Q9NUQ2 364 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 DNM3Q9UQ16 869 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 PCDHB6Q9Y5E3 794 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 ZMYM2Q9UBW7 1377 aa8.55□□□□□ -1.04
SMARCE1-206ENST00000447024 CNTNAP2Q9UHC6 1331 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 FNDC1Q4ZHG4 1894 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 DDX3XO00571 662 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 MED24O75448 989 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 ERLIN2O94905 339 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 EYA4O95677 639 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 THBDP07204 575 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 C6P13671 934 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 SCP2P22307 547 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 NAMPTP43490 491 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 SOX9P48436 509 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 FAM187BQ17R55 369 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 NOTUMQ6P988 496 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 MRPL10Q7Z7H8 261 aaKnown RBP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 ZC3H18Q86VM9 953 aaKnown RBP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 HACE1Q8IYU2 909 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 LRRC43Q8N309 656 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 PIGOQ8TEQ8 1089 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 GDPD5Q8WTR4 605 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 TMEM143Q96AN5 459 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 SH2D3AQ9BRG2 576 aa8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 ZSCAN16Q9H4T2 348 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-206ENST00000447024 CERS4Q9HA82 394 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms