RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 OR6Y1Q8NGX8 325 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 MCRS1Q96EZ8 462 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 ASIC4Q96FT7 647 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 HES6Q96HZ4 224 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 TNIP3Q96KP6 325 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 CD274Q9NZQ7 290 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 STK39Q9UEW8 545 aa19.25■□□□□ 0.67
SHANK3-203ENST00000445220 CCNG2Q16589 344 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 OTUD5Q96G74 571 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 PIK3CDO00329 1044 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 MTSS1O43312 755 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 CNOT3O75175 753 aaKnown RBP19.24■□□□□ 0.67
SHANK3-203ENST00000445220 HLA-DRAP01903 254 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 PRKCBP05771 671 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 HIST1H2AGP0C0S8 130 aaPredicted RBP19.24■□□□□ 0.67
SHANK3-203ENST00000445220 HIST1H2ADP20671 130 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 RPA1P27694 616 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 DGUOKQ16854 277 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 FUT11Q495W5 492 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 ZC2HC1CQ53FD0 456 aaPredicted RBP19.24■□□□□ 0.67
SHANK3-203ENST00000445220 BNIPLQ7Z465 357 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 C19orf18Q8NEA5 215 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 HIST1H2AHQ96KK5 128 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 HIST1H2AJQ99878 128 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 GINS4Q9BRT9 223 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 H2AFJQ9BTM1 129 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 RMI1Q9H9A7 625 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 UNC5CO95185 931 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 ATP6V1C1P21283 382 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 PTDSS1P48651 473 aaKnown RBP19.24■□□□□ 0.67
SHANK3-203ENST00000445220 NAPEPLDQ6IQ20 393 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 SGF29Q96ES7 293 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 C1orf50Q9BV19 199 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 ADGRA2Q96PE1 1338 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 GPD1P21695 349 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 PSMB9P28065 219 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 MTFR1Q15390 333 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 RGS21Q2M5E4 152 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 SPON2Q9BUD6 331 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 TLR10Q9BXR5 811 aa19.24■□□□□ 0.67
SHANK3-203ENST00000445220 PNMA8CA0A1B0GUJ8 204 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ZNF263O14978 683 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TIMM44O43615 452 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 GZMAP12544 262 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 CDK16Q00536 496 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 SPDYE7PQ495Y7 208 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 VPS37AQ8NEZ2 397 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 MTMR2Q13614 643 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 AGAP9Q5VTM2 703 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ARMCX6Q7L4S7 300 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ATPAF2Q8N5M1 289 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TADA1Q96BN2 335 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 NAT9Q9BTE0 207 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 FANCEQ9HB96 536 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TUBA8Q9NY65 449 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ZNF70Q9UC06 446 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-203ENST00000445220 EEF2KO00418 725 aaKnown RBP19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ITGA4P13612 1032 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TNFRSF8P28908 595 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 PTPN7P35236 360 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 NEDD8Q15843 81 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 SLC45A4Q5BKX6 768 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TCHHL1Q5QJ38 904 aaPredicted RBP19.23■□□□□ 0.67
SHANK3-203ENST00000445220 PLGRKTQ9HBL7 147 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 TULP2O00295 520 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 CAPN15O75808 1086 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 ACOT2P49753 483 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 CREG2Q8IUH2 290 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 RNF149Q8NC42 400 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 URGCPQ8TCY9 931 aa19.23■□□□□ 0.67
SHANK3-203ENST00000445220 FER1L4A9Z1Z3 1794 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 FOXN3O00409 490 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 STX7O15400 261 aaKnown RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 CPA3P15088 417 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ATP6V1B2P21281 511 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 RGS7P49802 495 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 SERPINH1P50454 418 aaKnown RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ITPK1Q13572 414 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 BOLA3Q53S33 107 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ZNF618Q5T7W0 954 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 GPAT2Q6NUI2 795 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TTC27Q6P3X3 843 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 SEPT1Q8WYJ6 367 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 RPS6KL1Q9Y6S9 549 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ITGB3BPQ13352 177 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 NFYCQ13952 458 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 SVOPQ8N4V2 548 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 RDM1Q8NG50 284 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 REXO4Q9GZR2 422 aaKnown RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 NRDE2Q9H7Z3 1164 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ABLIM1O14639 778 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TROAPQ12815 778 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TRAF2Q12933 501 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 BAATQ14032 418 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TRIM71Q2Q1W2 868 aaKnown RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 USP13Q92995 863 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 KIF12Q96FN5 646 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms