RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 OVCA2Q8WZ82 227 aa25.28■■□□□ 1.64
C9orf3-207ENST00000445181 DLGAP2Q9P1A6 1054 aa25.28■■□□□ 1.64
C9orf3-207ENST00000445181 CHORDC1Q9UHD1 332 aaPredicted RBP25.28■■□□□ 1.64
C9orf3-207ENST00000445181 NUP210Q8TEM1 1887 aaPredicted RBP25.28■■□□□ 1.64
C9orf3-207ENST00000445181 USP17L7P0C7H9 530 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 HDCP19113 662 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 CD72P21854 359 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 GDI1P31150 447 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 BCAT1P54687 386 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 UBXN2BQ14CS0 331 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 TPRG1Q6ZUI0 275 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 GPRIN1Q7Z2K8 1008 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 ARL14EPQ8N8R7 260 aaPredicted RBP25.27■■□□□ 1.64
C9orf3-207ENST00000445181 TTC16Q8NEE8 873 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 DNASE1L2Q92874 299 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 RSPRY1Q96DX4 576 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 CYP2S1Q96SQ9 504 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 SIX2Q9NPC8 291 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 HEBP1Q9NRV9 189 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 TDP1Q9NUW8 608 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 OBP2AQ9NY56 170 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 IL37Q9NZH6 218 aa25.27■■□□□ 1.64
C9orf3-207ENST00000445181 MTF2Q9Y483 593 aaPredicted RBP25.27■■□□□ 1.64
C9orf3-207ENST00000445181 FAM170BA6NMN3 283 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 BECN2A8MW95 431 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 HHLA1C9JL84 531 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 O00370 1275 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 ZNF263O14978 683 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 BRD2P25440 801 aaKnown RBP25.26■■□□□ 1.63
C9orf3-207ENST00000445181 NBL1P41271 181 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 ZNF132P52740 706 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 COPB1P53618 953 aaKnown RBP25.26■■□□□ 1.63
C9orf3-207ENST00000445181 STILQ15468 1287 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 ZSCAN23Q3MJ62 389 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 TTC30AQ86WT1 665 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 TFAP2BQ92481 460 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 IRF7Q92985 503 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 USP13Q92995 863 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-207ENST00000445181 FUCA2Q9BTY2 467 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 LSM14BQ9BX40 385 aaKnown RBP25.26■■□□□ 1.63
C9orf3-207ENST00000445181 GMIPQ9P107 970 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 LIMA1Q9UHB6 759 aaKnown RBP25.26■■□□□ 1.63
C9orf3-207ENST00000445181 DNAJC12Q9UKB3 198 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 COL4A3Q01955 1670 aa25.26■■□□□ 1.63
C9orf3-207ENST00000445181 CALCAP01258 141 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 GLULP15104 373 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 ZNF18P17022 549 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 BST2Q10589 180 aaKnown RBP25.25■■□□□ 1.63
C9orf3-207ENST00000445181 LCLAT1Q6UWP7 414 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 DHX40Q8IX18 779 aaKnown RBP25.25■■□□□ 1.63
C9orf3-207ENST00000445181 UBA3Q8TBC4 463 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 BPIFB1Q8TDL5 484 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 SLC22A12Q96S37 553 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 OSBPL6Q9BZF3 934 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 UBXN6Q9BZV1 441 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 KIF9Q9HAQ2 790 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 LTB4R2Q9NPC1 389 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 THG1LQ9NWX6 298 aaKnown RBP25.25■■□□□ 1.63
C9orf3-207ENST00000445181 CNTN6Q9UQ52 1028 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 CCL26Q9Y258 94 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 NCANO14594 1321 aa25.25■■□□□ 1.63
C9orf3-207ENST00000445181 ANAPC1Q9H1A4 1944 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 PATJQ8NI35 1801 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 FAM92AA1XBS5 289 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 PROB1E7EW31 1015 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 M0QYV0 167 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 CYP26A1O43174 497 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 PFKLP17858 780 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 PDE4CQ08493 712 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 KCNMA1Q12791 1236 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 RAPGEF1Q13905 1077 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 CNGA2Q16280 664 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 ZNF852Q6ZMS4 543 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 PIGZQ86VD9 579 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 NELL2Q99435 816 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 TLR8Q9NR97 1041 aaKnown RBP25.24■■□□□ 1.63
C9orf3-207ENST00000445181 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.24■■□□□ 1.63
C9orf3-207ENST00000445181 SCML2Q9UQR0 700 aa25.24■■□□□ 1.63
C9orf3-207ENST00000445181 XPO1O14980 1071 aaKnown RBP25.23■■□□□ 1.63
C9orf3-207ENST00000445181 GFRA3O60609 400 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 SETSIPP0DME0 302 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 GNA15P30679 374 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 KIF11P52732 1056 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 FCHO2Q0JRZ9 810 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 ZNF268Q14587 947 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-207ENST00000445181 HECTD3Q5T447 861 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 KLHDC7AQ5VTJ3 777 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 LRRC3BQ96PB8 259 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 NACA2Q9H009 215 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 HSD3B7Q9H2F3 369 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 TRPV5Q9NQA5 729 aa25.23■■□□□ 1.63
C9orf3-207ENST00000445181 AJAP1Q9UKB5 411 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-207ENST00000445181 THAP12O43422 761 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 MED7O43513 233 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 ATP1A3P13637 1013 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 TARSP26639 723 aaKnown RBP25.22■■□□□ 1.63
C9orf3-207ENST00000445181 ARHGAP29Q52LW3 1261 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 CC2D1AQ6P1N0 951 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-207ENST00000445181 C1orf210Q8IVY1 113 aa25.22■■□□□ 1.63
C9orf3-207ENST00000445181 SHC3Q92529 594 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms