RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 WDR6Q9NNW5 1121 aaKnown RBP18.16■□□□□ 0.5
LIME1-202ENST00000444951 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 CLUHO75153 1309 aa18.16■□□□□ 0.5
LIME1-202ENST00000444951 TRIM66O15016 1216 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 CCL16O15467 120 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 ATF6P18850 670 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 MEA1Q16626 185 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 ASTLQ6HA08 431 aaPredicted RBP18.15■□□□□ 0.5
LIME1-202ENST00000444951 ELMSAN1Q6PJG2 1045 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 VPS36Q86VN1 386 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 TMEM35BQ8NCS4 154 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
LIME1-202ENST00000444951 ATOH1Q92858 354 aaPredicted RBP18.15■□□□□ 0.5
LIME1-202ENST00000444951 PLEKHA4Q9H4M7 779 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 MAFFQ9ULX9 164 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 DUSP12Q9UNI6 340 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 MYH10P35580 1976 aa18.15■□□□□ 0.5
LIME1-202ENST00000444951 PTPRDP23468 1912 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 XPO1O14980 1071 aaKnown RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 PI15O43692 258 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 AKR1B10O60218 316 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 PAPLNO95428 1278 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 LCP1P13796 627 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 GBP2P32456 591 aaPredicted RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 GPD2P43304 727 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 EPHB3P54753 998 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 TDGQ13569 410 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 TAF12Q16514 161 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 CLEC16AQ2KHT3 1053 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 PKDCCQ504Y2 493 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 PMF1Q6P1K2 205 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 GPRIN1Q7Z2K8 1008 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 PIGZQ86VD9 579 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 WDTC1Q8N5D0 677 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 FLCNQ8NFG4 579 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 ST13P5Q8NFI4 369 aaPredicted RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 SLC30A5Q8TAD4 765 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 PDLIM2Q96JY6 352 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 BAG1Q99933 345 aaPredicted RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 SYT11Q9BT88 431 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 LHX5Q9H2C1 402 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 NHEJ1Q9H9Q4 299 aaPredicted RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 ADAMTS1Q9UHI8 967 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 DPP7Q9UHL4 492 aa18.14■□□□□ 0.49
LIME1-202ENST00000444951 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.49
LIME1-202ENST00000444951 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.493e-24■■□□□ 12.6
LIME1-202ENST00000444951 ZMYND10O75800 440 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 VEPH1Q14D04 833 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 CYP26C1Q6V0L0 522 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 TRIM72Q6ZMU5 477 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 OLIG1Q8TAK6 271 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 SLC35F5Q8WV83 523 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 NOX5Q96PH1 765 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 MFSD1Q9H3U5 465 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 SYNCQ9H7C4 482 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 LRRC4Q9HBW1 653 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 CSNK1G1Q9HCP0 422 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 HSFX1Q9UBD0 423 aa18.13■□□□□ 0.49
LIME1-202ENST00000444951 A0A087X0T9 212 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 SOWAHDA6NJG2 315 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 SLC38A8A6NNN8 435 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 LSM8O95777 96 aaKnown RBP18.12■□□□□ 0.49
LIME1-202ENST00000444951 C1RP00736 705 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 FAM228BP0C875 321 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 SLC5A3P53794 718 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 NOMO3P69849 1222 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 GFPT1Q06210 699 aaPredicted RBP18.12■□□□□ 0.49
LIME1-202ENST00000444951 PDCLQ13371 301 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 PLD1Q13393 1074 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 C2CD6Q53TS8 623 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 ELMOD1Q8N336 334 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 SCAMP5Q8TAC9 235 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 HDAC7Q8WUI4 952 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 MIS12Q9H081 205 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 TAS2R14Q9NYV8 317 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 EPS15L1Q9UBC2 864 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
LIME1-202ENST00000444951 HHLA1C9JL84 531 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 GFRA3O60609 400 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 CYP1A1P04798 512 aaPredicted RBP18.11■□□□□ 0.49
LIME1-202ENST00000444951 NSFP46459 744 aaKnown RBP18.11■□□□□ 0.49
LIME1-202ENST00000444951 PLA2G4AP47712 749 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 CLCN5P51795 746 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 TKTL1P51854 596 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 KIF11P52732 1056 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 NUBP1P53384 320 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 USP46P62068 366 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 CDK17Q00537 523 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 ADIGQ0VDE8 80 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms