RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ARHGEF39Q8N4T4 335 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 POU5F2Q8N7G0 328 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 OR13H1Q8NG92 308 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 CALML4Q96GE6 196 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ABHD1Q96SE0 405 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 MAP7D2Q96T17 732 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 NAP1L3Q99457 506 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 OSMRQ99650 979 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 FDXACB1Q9BRP7 624 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 TRPV6Q9H1D0 765 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 NKX2-4Q9H2Z4 354 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 SDHAF3Q9NRP4 125 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 LRP2BPQ9P2M1 347 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 RGS17Q9UGC6 210 aaPredicted RBP4.17□□□□□ -1.74
UBR3-206ENST00000444475 MAN2B2Q9Y2E5 1009 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ZNF281Q9Y2X9 895 aa4.17□□□□□ -1.74
UBR3-206ENST00000444475 ZNF536O15090 1300 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 NPHS1O60500 1241 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TSPAN1O60635 241 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TPM1P09493 284 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ALADP13716 330 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 RPA1P27694 616 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PTPN4P29074 926 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 MDH1P40925 334 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 MAP2K6P52564 334 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ARHGDIBP52566 201 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TYRO3Q06418 890 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 LMAN2Q12907 356 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TNFAIP1Q13829 316 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PLS1Q14651 629 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 IRF3Q14653 427 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 LRIT3Q3SXY7 679 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 USP17L6PQ6QN14 398 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ADCK1Q86TW2 530 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 C7orf57Q8NEG2 295 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF653Q96CK0 615 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 HSH2DQ96JZ2 352 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 FAM84AQ96KN4 292 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PINK1Q9BXM7 581 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF341Q9BYN7 854 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 MOCS1Q9NZB8 636 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 VPS18Q9P253 973 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 FAM205AQ6ZU69 1335 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 NCF1BA6NI72 391 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 SLC9B1P1A6NJY1 282 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 FAM170BA6NMN3 283 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 NCF1CA8MVU1 366 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 KRIT1O00522 736 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 CD3EAPO15446 510 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 PHGDHO43175 533 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 SIX3O95343 332 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 CDK4P11802 303 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TYRP14679 529 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TRIM21P19474 475 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 PRKACBP22694 351 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PTAFRP25105 342 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 HNF1BP35680 557 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 WASP42768 502 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ACTR2P61160 394 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 GALNT2Q10471 571 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 GIT2Q14161 759 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 HIF1AQ16665 826 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.16□□□□□ -1.74
UBR3-206ENST00000444475 MYLK3Q32MK0 819 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 METAP1DQ6UB28 335 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 CDH24Q86UP0 819 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 EFCAB13Q8IY85 973 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ULK2Q8IYT8 1036 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 CCDC110Q8TBZ0 833 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 DCAF4Q8WV16 495 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PERPQ96FX8 193 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 SLC6A18Q96N87 628 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 MTMR9Q96QG7 549 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TRIM2Q9C040 744 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF552Q9H707 407 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 SH2B1Q9NRF2 756 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 INTS13Q9NVM9 706 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 GABRQQ9UN88 632 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 NR2E3Q9Y5X4 410 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 KIF7Q2M1P5 1343 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 A0A096LPE4 126 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 A0A1W2PPZ6 126 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 A0A1W2PQ09 198 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 LRRD1A4D1F6 860 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 DTNBO60941 627 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 LILRB5O75023 590 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 GLRA2P23416 452 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 LSP1P33241 339 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 CARD18P57730 90 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TAP2Q03519 686 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 SPAG1Q07617 926 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 TUBB2AQ13885 445 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 EFTUD2Q15029 972 aaKnown RBP eCLIP4.16□□□□□ -1.74
UBR3-206ENST00000444475 PDK1Q15118 436 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PTPAQ15257 358 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 DGKDQ16760 1214 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 C3orf36Q3SXR2 165 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 DEPDC1Q5TB30 811 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PSTKQ8IV42 348 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 DIS3L2Q8IYB7 885 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms