RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 CCR3P51677 355 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 MTAPQ13126 283 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 PPP1R26Q5T8A7 1209 aaPredicted RBP17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 CLEC20AQ6ZU45 233 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 PAQR9Q6ZVX9 377 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 ATRIPQ8WXE1 791 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 CLDN23Q96B33 292 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 FAXDC2Q96IV6 333 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 DACH1Q9UI36 760 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 PCDHB4Q9Y5E5 795 aa17.71■□□□□ 0.43
TSPAN9-204ENST00000444315 F5P12259 2224 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 BEST1O76090 585 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 BMP6P22004 513 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 NBL1P41271 181 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 GOLGA7BQ2TAP0 167 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 SGO2Q562F6 1265 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 TXNDC11Q6PKC3 985 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 TSSK4Q6SA08 328 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 TADA2BQ86TJ2 420 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 FAM83CQ9BQN1 747 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 CHRDQ9H2X0 955 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 CLSTN2Q9H4D0 955 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 CCSER2Q9H7U1 834 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 HPS4Q9NQG7 708 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 NAGPAQ9UK23 515 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 LSM7Q9UK45 103 aaKnown RBP17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 FBXO4Q9UKT5 387 aa17.7■□□□□ 0.42
TSPAN9-204ENST00000444315 PES1O00541 588 aaKnown RBP17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 CYP26A1O43174 497 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 COCHO43405 550 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 OAS1P00973 400 aaKnown RBP17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 MTIF2P46199 727 aaKnown RBP17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 SLC7A9P82251 487 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 P2RY13Q9BPV8 354 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 DUSP16Q9BY84 665 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 FAM124BQ9H5Z6 455 aaPredicted RBP17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 CSNK1G1Q9HCP0 422 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 RWDD2AQ9UIY3 292 aa17.69■□□□□ 0.42
TSPAN9-204ENST00000444315 CACNA1HO95180 2353 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 TNFRSF10BO14763 440 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 TLR5O60602 858 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 CHRNB1P11230 501 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 RALAP11233 206 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 KRT5P13647 590 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 CXCL12P48061 93 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 RAD23BP54727 409 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 NRLP54845 237 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 C10orf120Q5SQS8 335 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 TMEM270Q6UE05 265 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 RSRC2Q7L4I2 434 aaKnown RBP17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 SLC4A11Q8NBS3 891 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 ZMIZ2Q8NF64 920 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 RIN3Q8TB24 985 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 CD101Q93033 1021 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 CNOT6LQ96LI5 555 aaKnown RBP17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 RNF38Q9H0F5 515 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 CACNA1IQ9P0X4 2223 aa17.68■□□□□ 0.42
TSPAN9-204ENST00000444315 P4HA2O15460 535 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 ADH1CP00326 375 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 GJA4P35212 333 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 ATP5C1P36542 298 aaKnown RBP17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 TUBP50607 506 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 BCAT1P54687 386 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 EML3Q32P44 896 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 BTBD8Q5XKL5 378 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 Q6ZS52 159 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 FAM114A1Q8IWE2 563 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 MLKLQ8NB16 471 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 LRRC4Q9HBW1 653 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 PNPLA8Q9NP80 782 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 TBC1D14Q9P2M4 693 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 RAB23Q9ULC3 237 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 SCML2Q9UQR0 700 aa17.67■□□□□ 0.42
TSPAN9-204ENST00000444315 A0A1W2PQH9 124 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 PRR23AA6NEV1 266 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 ATG13O75143 517 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 LMNAP02545 664 aaKnown RBP17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 VDRP11473 427 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 RARGP13631 454 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 TCF3P15923 654 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 DRD1P21728 446 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 ZNF528Q3MIS6 628 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 FOXR2Q6PJQ5 311 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 RRAGAQ7L523 313 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 SIX6OS1Q8N1H7 587 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 ARHGAP18Q8N392 663 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 SYNPOQ8N3V7 929 aa17.66■□□□□ 0.42
TSPAN9-204ENST00000444315 SPEM1Q8N4L4 309 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms