RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PARVAQ9NVD7 372 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PKD2L2Q9NZM6 624 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 RABGEF1Q9UJ41 708 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 KLRK1P26718 216 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PKNOX1P55347 436 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 OXCT1P55809 520 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 GPSM2P81274 684 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 MYBPC2Q14324 1141 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 SYT11Q9BT88 431 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 MINPP1Q9UNW1 487 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 TLR3O15455 904 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 AOC1P19801 751 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PDCD6IPQ8WUM4 868 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 DEPDC1BQ8WUY9 529 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 DHX38Q92620 1227 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 HNRNPABQ99729 332 aaKnown RBP5.21□□□□□ -1.58
HERC1-201ENST00000443617 TMEM121Q9BTD3 319 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 CD209Q9NNX6 404 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 ZNHIT2Q9UHR6 403 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 PPME1Q9Y570 386 aa5.21□□□□□ -1.58
HERC1-201ENST00000443617 CYP3A7-CYP3A51PA0A087WV96 503 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CYP3A7P24462 503 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 IGBP1P78318 339 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SLC44A1Q8WWI5 657 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 LIN28AQ9H9Z2 209 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 AVENQ9NQS1 362 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 PIK3C2BO00750 1634 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 AP1G1O43747 822 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 RPA1P27694 616 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 EIF3EP60228 445 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 ROR1Q01973 937 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BSPRYQ5W0U4 402 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 PLEKHA7Q6IQ23 1121 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SETD3Q86TU7 594 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 MKL1Q969V6 931 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 DCUN1D1Q96GG9 259 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CCDC130P13994 396 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB1P30740 379 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 GSTM4Q03013 218 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 RNASEH2BQ5TBB1 312 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 AFAP1L2Q8N4X5 818 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 FBXL13Q8NEE6 735 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TFB1MQ8WVM0 346 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 OLFM1Q99784 485 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CBWD1Q9BRT8 395 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SLC8A2Q9UPR5 921 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 NUB1Q9Y5A7 615 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SNCAIPQ9Y6H5 919 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CEPT1Q9Y6K0 416 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 MROH2AA6NES4 1674 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 C1orf232A0A0U1RR37 186 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 ARID1AO14497 2285 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BMP10O95393 424 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 PRDX6P30041 224 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TMEM270Q6UE05 265 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 XRN1Q8IZH2 1706 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 FEZF2Q8TBJ5 459 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 MMP19Q99542 508 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CXorf21Q9HAI6 301 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 NOCTQ9UK39 431 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 ATF5Q9Y2D1 282 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 RIC1Q4ADV7 1423 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TCRBV9S1A1TA0A576 114 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB7O75635 380 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SCYL1Q96KG9 808 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 USP29Q9HBJ7 922 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BCL10O95999 233 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 LDHAP00338 332 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 SPATA31C1P0DKV0 1188 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CDH2P19022 906 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 GRK2P25098 689 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CDK18Q07002 472 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 GPATCH4Q5T3I0 446 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 DLG5Q8TDM6 1919 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 DNALI1O14645 258 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 CNOT3O75175 753 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 SLC1A6P48664 564 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 MOGQ16653 247 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BRDTQ58F21 947 aaPredicted RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 POTEHQ6S545 545 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SPOCD1Q6ZMY3 1216 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 KCTD1Q719H9 257 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 ABRAQ8N0Z2 381 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 ITPKCQ96DU7 683 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 HSPA4LO95757 839 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 ZNF618Q5T7W0 954 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 CIAPIN1Q6FI81 312 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 C1orf186Q6ZWK4 172 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 EPS8L1Q8TE68 723 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SEMA6AQ9H2E6 1030 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 TRDMT1O14717 391 aaKnown RBP5.2□□□□□ -1.58
HERC1-201ENST00000443617 HLA-DOAP06340 250 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 BPGMP07738 259 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 AP3B2Q13367 1082 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 SLFN13Q68D06 897 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 NIPAL1Q6NVV3 410 aa5.2□□□□□ -1.58
HERC1-201ENST00000443617 C3orf67Q6ZVT6 689 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms