RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 TNMDQ9H2S6 317 aa8.88□□□□□ -0.99
TOP3B-209ENST00000442653 SNX25Q9H3E2 840 aa8.88□□□□□ -0.99
TOP3B-209ENST00000442653 WASF3Q9UPY6 502 aa8.88□□□□□ -0.99
TOP3B-209ENST00000442653 CELSR3Q9NYQ7 3312 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 MYO18AQ92614 2054 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 C1QTNF9BB2RNN3 333 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 CLIC2O15247 247 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 EIF3DO15371 548 aaKnown RBP eCLIP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 COCHO43405 550 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KLF8O95600 359 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TOP3BO95985 862 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 MBL2P11226 248 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TNNI1P19237 187 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 SPINK2P20155 84 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 CASP1P29466 404 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 PTGER3P43115 390 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KIR2DL1P43626 348 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 PPP3CCP48454 512 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 DHPSP49366 369 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 CASP4P49662 377 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 MYL6P60660 151 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TNNC1P63316 161 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ASIC1P78348 528 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 MRPS21P82921 87 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KDSRQ06136 332 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 EHHADHQ08426 723 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ZNF252P-AS1Q0IIN9 211 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 PSMD6Q15008 389 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 FAM26FQ5R3K3 315 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ARMCX6Q7L4S7 300 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 NELFCDQ8IXH7 590 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KIAA1958Q8N8K9 716 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 LINC00301Q8NCQ3 95 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 B3GALNT2Q8NCR0 500 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 SCAMP5Q8TAC9 235 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ZNF507Q8TCN5 953 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 PIGKQ92643 395 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ELMO3Q96BJ8 720 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 SLITRK1Q96PX8 696 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KCNK16Q96T55 309 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 PNKPQ96T60 521 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 CGRRF1Q99675 332 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 SMYD3Q9H7B4 428 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 KIAA1586Q9HCI6 787 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TMEM9BQ9NQ34 198 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 ARHGEF4Q9NR80 690 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TMEM74BQ9NUR3 256 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 EHD2Q9NZN4 543 aa8.87□□□□□ -0.99
TOP3B-209ENST00000442653 NXF1Q9UBU9 619 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 MBD1Q9UIS9 605 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 TNRC6BQ9UPQ9 1833 aaKnown RBP8.87□□□□□ -0.99
TOP3B-209ENST00000442653 A0A0A0MRY4 1105 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 A8MXQ7 604 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 SLC9A3R1O14745 358 aaPredicted RBP8.86□□□□□ -0.99
TOP3B-209ENST00000442653 ADH1CP00326 375 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 PROS1P07225 676 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 ADH5P11766 374 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 YWHAQP27348 245 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 EIF2DP41214 584 aaKnown RBP8.86□□□□□ -0.99
TOP3B-209ENST00000442653 P2RY2P41231 377 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 GRIA2P42262 883 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 PGFP49763 221 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 CDH8P55286 799 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 FOXC1Q12948 553 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 STK38Q15208 465 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 DAB2IPQ5VWQ8 1189 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 TDRD10Q5VZ19 366 aaKnown RBP8.86□□□□□ -0.99
TOP3B-209ENST00000442653 CNNM4Q6P4Q7 775 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 SHC4Q6S5L8 630 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 PAQR9Q6ZVX9 377 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 ETFBKMTQ8IXQ9 262 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 TMEFF1Q8IYR6 380 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 NUP93Q8N1F7 819 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 XXYLT1Q8NBI6 393 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 PLEKHO2Q8TD55 490 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 WHAMMQ8TF30 809 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 HMGB4Q8WW32 186 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 WBP2Q969T9 261 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 DHX58Q96C10 678 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 CCSER2Q9H7U1 834 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
TOP3B-209ENST00000442653 CHORDC1Q9UHD1 332 aaPredicted RBP8.86□□□□□ -0.99
TOP3B-209ENST00000442653 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 PI4KAP42356 2102 aa8.86□□□□□ -0.99
TOP3B-209ENST00000442653 ATXN2Q99700 1313 aaKnown RBP8.85□□□□□ -0.99
TOP3B-209ENST00000442653 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
TOP3B-209ENST00000442653 TCRBV21S2A2A0A5A6 115 aa8.85□□□□□ -0.99
TOP3B-209ENST00000442653 E2F8A0AVK6 867 aa8.85□□□□□ -0.99
TOP3B-209ENST00000442653 TNFRSF10BO14763 440 aa8.85□□□□□ -0.99
TOP3B-209ENST00000442653 TRIM24O15164 1050 aa8.85□□□□□ -0.99
TOP3B-209ENST00000442653 SPTLC2O15270 562 aa8.85□□□□□ -0.99
TOP3B-209ENST00000442653 STX6O43752 255 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms