RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ARHGEF18Q6ZSZ5 1173 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 C3orf62Q6ZUJ4 267 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ZBTB46Q86UZ6 589 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CATSPER3Q86XQ3 398 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CREG2Q8IUH2 290 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 HIPK4Q8NE63 616 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 OR6Y1Q8NGX8 325 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 GRAMD1AQ96CP6 724 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 SPSB2Q99619 263 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 COA1Q9GZY4 146 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 ZMYND12Q9H0C1 365 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 GPR108Q9NPR9 543 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 SLC35C2Q9NQQ7 365 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 CLDND1Q9NY35 253 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 STX18Q9P2W9 335 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 EPS15L1Q9UBC2 864 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RSL24D1Q9UHA3 163 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 BCAP29Q9UHQ4 241 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 RPL26L1Q9UNX3 145 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 CTNND2Q9UQB3 1225 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 APOBEC2Q9Y235 224 aaKnown RBP2.89□□□□□ -1.95
LIG4-203ENST00000442234 SLC27A5Q9Y2P5 690 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 PCDHGA8Q9Y5G5 932 aa2.89□□□□□ -1.95
LIG4-203ENST00000442234 KIF20BQ96Q89 1820 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 C15orf38-AP3S2A0A0A6YYH1 394 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PNMA6EA0A0J9YXQ4 647 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 TYW5A2RUC4 315 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 A8MU76 341 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 F8W810 466 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KCNK3O14649 394 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 APOL1O14791 398 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DAPK3O43293 454 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ASNA1O43681 348 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 GAS7O60861 476 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 SIN3BO75182 1162 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PAHP00439 452 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 AGTP01019 485 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FAM228BP0C875 321 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 MYCLP12524 364 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 CSF2RAP15509 400 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 EEF1DP29692 281 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 STT3AP46977 705 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 AKR1D1P51857 326 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 WNT7BP56706 349 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PSMC6P62333 389 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 EHHADHQ08426 723 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KLHL30Q0D2K2 578 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KCNMA1Q12791 1236 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 STRN3Q13033 797 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 LAMC2Q13753 1193 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 NFE2L1Q14494 772 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KYNUQ16719 465 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PHKG1Q16816 387 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 INSCQ1MX18 579 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 WDR72Q3MJ13 1102 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 SPDYAQ5MJ70 313 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 RABGAP1LQ5R372 815 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 IL23RQ5VWK5 629 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 RSBN1Q5VWQ0 802 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 SDE2Q6IQ49 451 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KRT80Q6KB66 452 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FAM122CQ6P4D5 195 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 C4orf50Q6ZRC1 276 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ARPINQ7Z6K5 226 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 UNC45BQ8IWX7 931 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 TERB1Q8NA31 727 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 PJA1Q8NG27 643 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ATOH1Q92858 354 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 FAR2Q96K12 515 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 TBATAQ96M53 351 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ZNF317Q96PQ6 595 aaPredicted RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 PLEKHF1Q96S99 279 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FOXP3Q9BZS1 431 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ISCUQ9H1K1 167 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 IL25Q9H293 177 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 EPHX3Q9H6B9 360 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 USP29Q9HBJ7 922 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 SLC38A10Q9HBR0 1119 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KCNMB3Q9NPA1 279 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 NLRC4Q9NPP4 1024 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FBXO28Q9NVF7 368 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CEP72Q9P209 647 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FBXO40Q9UH90 709 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 MAN1B1Q9UKM7 699 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 VPS4AQ9UN37 437 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CFL2Q9Y281 166 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 DNAJC16Q9Y2G8 782 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 WASF2Q9Y6W5 498 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 GAKO14976 1311 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 FLT1P17948 1338 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CACNA1IQ9P0X4 2223 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 LOC105371267A0A1B0GV96 52 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 TMEM120BA0PK00 339 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 ZNF839A8K0R7 811 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 CENPBD1B2RD01 187 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KIF28PB7ZC32 967 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 KRIT1O00522 736 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 TSPAN4O14817 238 aa2.88□□□□□ -1.95
LIG4-203ENST00000442234 POLR2DO15514 142 aaKnown RBP2.88□□□□□ -1.95
LIG4-203ENST00000442234 RANBP6O60518 1105 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms