RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 COMMD8Q9NX08 183 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 SDK1Q7Z5N4 2213 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 E2F8A0AVK6 867 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 SLC30A4O14863 429 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 IKBKBO14920 756 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 VNN1O95497 513 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 OLFM2O95897 454 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 FAM200BP0CF97 657 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 ADH5P11766 374 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 NR2F2P24468 414 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
TTC28-203ENST00000442232 GBP1P32455 592 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 CLDN10P78369 228 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 DHCR24Q15392 516 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 ZACNQ401N2 412 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 INTS8Q75QN2 995 aaKnown RBP12.48□□□□□ -0.41
TTC28-203ENST00000442232 UNC93AQ86WB7 457 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 TTC30AQ86WT1 665 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 TMEM174Q8WUU8 243 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 PNKPQ96T60 521 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
TTC28-203ENST00000442232 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 PCDHGA5Q9Y5G8 931 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 MYOFQ9NZM1 2061 aa12.48□□□□□ -0.41
TTC28-203ENST00000442232 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 MAPK13O15264 365 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 COCHO43405 550 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 HLA-DRAP01903 254 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 CCDC130P13994 396 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 OPRD1P41143 372 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 EIF2DP41214 584 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 TUBP50607 506 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 VAMP7P51809 220 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 NDST1P52848 882 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 DLG4P78352 724 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 KDSRQ06136 332 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 USP39Q53GS9 565 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 SV2AQ7L0J3 742 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 SLC2A14Q8TDB8 520 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 USP33Q8TEY7 942 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 ZC3H10Q96K80 434 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 KCNK16Q96T55 309 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 FAM49BQ9NUQ9 324 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 GMIPQ9P107 970 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 EBF1Q9UH73 591 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 CHORDC1Q9UHD1 332 aaPredicted RBP12.47□□□□□ -0.41
TTC28-203ENST00000442232 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 DNAH14Q0VDD8 3507 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
TTC28-203ENST00000442232 NCOR2Q9Y618 2525 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 KAT7O95251 611 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ASS1P00966 412 aaKnown RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 ZNF806P0C7X5 589 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 IRF1P10914 325 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ADORA2BP29275 332 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 HOXC13P31276 330 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 PSMC2P35998 433 aaKnown RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 MPLP40238 635 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 GRIA2P42262 883 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 NDUFA8P51970 172 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 MAP3K7CLP57077 242 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ZXDBP98169 803 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 GAD2Q05329 585 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ORC1Q13415 861 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 SF3A2Q15428 464 aaKnown RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 PLK5Q496M5 336 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 HSF5Q4G112 596 aaPredicted RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 PPM1JQ5JR12 505 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ANO7Q6IWH7 933 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 FAM186BQ8IYM0 893 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ADGRG2Q8IZP9 1017 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 FUKQ8N0W3 1084 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 SCAMP5Q8TAC9 235 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 SPACA7Q96KW9 195 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 SDCBP2Q9H190 292 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 CCSER2Q9H7U1 834 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 MMRN2Q9H8L6 949 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms