RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 HPS3Q969F9 1004 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 FBXO32Q969P5 355 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 RMDN1Q96DB5 314 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 SMARCD1Q96GM5 515 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 NACA2Q9H009 215 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 BLZF1Q9H2G9 400 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 DMAP1Q9NPF5 467 aaPredicted RBP8.26□□□□□ -1.09
CD44-211ENST00000442151 HPS4Q9NQG7 708 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 DMAC2Q9NW81 257 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 RMND1Q9NWS8 449 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 DMDP11532 3685 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 TICRRQ7Z2Z1 1910 aa8.26□□□□□ -1.09
CD44-211ENST00000442151 CACNA1IQ9P0X4 2223 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 ZNF840PA6NDX5 716 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 GOLGA6L4A6NEF3 574 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 K7ESF4 209 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 AXIN1O15169 862 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 APODP05090 189 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 MBL2P11226 248 aaPredicted RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 HOXD13P35453 343 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 TNFRSF4P43489 277 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 GPR15P49685 360 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 WNT7BP56706 349 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 SLC8A3P57103 927 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 MYL6P60660 151 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 PSMC1P62191 440 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 GAD2Q05329 585 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 BECN1Q14457 450 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 EML3Q32P44 896 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 KMT5BQ4FZB7 885 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 SNX30Q5VWJ9 437 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 HEATR6Q6AI08 1181 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 IL31Q6EBC2 164 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 FSTL4Q6MZW2 842 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 CDK5RAP1Q96SZ6 601 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 PNKPQ96T60 521 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 DUSP9Q99956 384 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 MRPL45Q9BRJ2 306 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 FGFBP2Q9BYJ0 223 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 POLMQ9NP87 494 aaPredicted RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 CRTAC1Q9NQ79 661 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.095e-38■■■■■ 698.7
CD44-211ENST00000442151 TLR8Q9NR97 1041 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 RBM12Q9NTZ6 932 aaKnown RBP8.25□□□□□ -1.09
CD44-211ENST00000442151 EBF1Q9UH73 591 aa8.25□□□□□ -1.09
CD44-211ENST00000442151 ZNF638Q14966 1978 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 F8VP50 259 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 LEFTY2O00292 366 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 RNF40O75150 1001 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ATP2C2O75185 946 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 AVPP01185 164 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 C4BPAP04003 597 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 NR3C1P04150 777 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ARSAP15289 507 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 GTF2H1P32780 548 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 PSMC2P35998 433 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 VAMP7P51809 220 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 TAF10Q12962 218 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 GAS6Q14393 721 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 FOXD4L6Q3SYB3 417 aaPredicted RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 EOGTQ5NDL2 527 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 SDE2Q6IQ49 451 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 TXNDC11Q6PKC3 985 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 FOXD4L3Q6VB84 417 aaPredicted RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 CRYBG2Q8N1P7 616 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ZC3H10Q96K80 434 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 CYP2S1Q96SQ9 504 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 B3GNT5Q9BYG0 378 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 SEMA4GQ9NTN9 838 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 LSM7Q9UK45 103 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 TRAF3IP3Q9Y228 551 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 CCL26Q9Y258 94 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ZNF510Q9Y2H8 683 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 FAM186AA6NE01 2351 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 TSC2P49815 1807 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 A0A1W2PQ27 194 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 A0A1W2PQ64 194 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 A0A1W2PQD8 194 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 SLC30A4O14863 429 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 RHOBTB3O94955 611 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 EGFP01133 1207 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 PFKFB1P16118 471 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 PPP1R2P41236 205 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 DGKEP52429 567 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 LIMK1P53667 647 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 YWHAEP62258 255 aaKnown RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 ZACNQ401N2 412 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 AASDHQ4L235 1098 aaPredicted RBP8.24□□□□□ -1.09
CD44-211ENST00000442151 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 TRIM68Q6AZZ1 485 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 PRR23CQ6ZRP0 262 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ADGRG2Q8IZP9 1017 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 ARHGAP18Q8N392 663 aa8.24□□□□□ -1.09
CD44-211ENST00000442151 FAM160A2Q8N612 972 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms