RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CARTPTQ16568 116 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 HSF5Q4G112 596 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 PARP10Q53GL7 1025 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ACAD10Q6JQN1 1059 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ZC3H3Q8IXZ2 948 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 FAM71DQ8N9W8 422 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 FNDC8Q8TC99 324 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 VPS11Q9H270 941 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 RIOX1Q9H6W3 641 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 UVRAGQ9P2Y5 699 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 XPO7Q9UIA9 1087 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 POMPQ9Y244 141 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 CICQ96RK0 1608 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 TIAM2Q8IVF5 1701 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 TMEM247A6NEH6 219 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SLC16A4O15374 487 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ATP9BO43861 1147 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SLITRK3O94933 977 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 GSTT2P0CG29 244 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 GSTT2BP0CG30 244 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 STIP1P31948 543 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SERPINB5P36952 375 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 RPL7AP62424 266 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 MYBPC1Q00872 1141 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 BTG3Q14201 252 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 COL19A1Q14993 1142 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 BSPRYQ5W0U4 402 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 CES4AQ5XG92 561 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 RHOT1Q8IXI2 618 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 LARGE2Q8N3Y3 721 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SMYD1Q8NB12 490 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 MOCOSQ96EN8 888 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 Q9H521 79 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 PIH1D1Q9NWS0 290 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 PCSK1NQ9UHG2 260 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 GNEQ9Y223 722 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 TRIM17Q9Y577 477 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 BCL9O00512 1426 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ESYT2A0FGR8 921 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 F5H6K3 240 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 LIASO43766 372 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 DNAJA2O60884 412 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 E2F6O75461 281 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 NTSR2O95665 410 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 FAM58BPP0C7Q3 252 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 OCM2P0CE71 109 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 OCMP0CE72 109 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ENO3P13929 434 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 KLRC2P26717 231 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SOX11P35716 441 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SLC1A1P43005 524 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 CRKLP46109 303 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 CDKL1Q00532 357 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 STX3Q13277 289 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ANO4Q32M45 955 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 LDLRAP1Q5SW96 308 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 KRT80Q6KB66 452 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 DCUN1D2Q6PH85 259 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SYDE1Q6ZW31 735 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF720Q7Z2F6 126 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 FBXO33Q7Z6M2 555 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 SLFN12Q8IYM2 578 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 NDUFAF2Q8N183 169 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.82□□□□□ -1.16
HDAC9-214ENST00000441542 LMO3Q8TAP4 145 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF398Q8TD17 642 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ATP2A3Q93084 1043 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 THAP11Q96EK4 314 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ATXN7L3BQ96GX2 97 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 NT5C1BQ96P26 610 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 PNPOQ9NVS9 261 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ARHGAP26Q9UNA1 814 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 DMTF1Q9Y222 760 aa7.82□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF536O15090 1300 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 IQANK1A0A1B0GTG1 560 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TRIM64CA6NLI5 447 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 F8VP50 259 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ZBTB5O15062 677 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 PLSCR1O15162 318 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ALOX15BO15296 676 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ITM2AO43736 263 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 STRNO43815 780 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ADRB2P07550 413 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CYP3A4P08684 503 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ABHD2P08910 425 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 FOSL1P15407 271 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MX2P20592 715 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 NUDT2P50583 147 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CACNB3P54284 484 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 CSE1LP55060 971 aaKnown RBP7.81□□□□□ -1.16
HDAC9-214ENST00000441542 PSMC5P62195 406 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 TCP10Q12799 353 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ITGA7Q13683 1181 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 ABCB5Q2M3G0 1257 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 EFHC2Q5JST6 749 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 MAP3K21Q5TCX8 1036 aa7.81□□□□□ -1.16
HDAC9-214ENST00000441542 UBE2Q1Q7Z7E8 422 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms