RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 PCSK1NQ9UHG2 260 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 AMACRQ9UHK6 382 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 VWA8A3KMH1 1905 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 LRRD1A4D1F6 860 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 NT5C1B-RDH14C9J2C7 533 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 PI4K2BG5E9Z4 385 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 HEXIM1O94992 359 aaKnown RBP20.6■□□□□ 0.89
APTR-204ENST00000440088 RARAP10276 462 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 CHRNA3P32297 505 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 NDUFV1P49821 464 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 SMTNL2Q2TAL5 461 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 FAM172AQ8WUF8 416 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 ZCWPW1Q9H0M4 648 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 PNPLA8Q9NP80 782 aa20.6■□□□□ 0.89
APTR-204ENST00000440088 NGRNQ9NPE2 291 aaKnown RBP20.6■□□□□ 0.89
APTR-204ENST00000440088 PTPRDP23468 1912 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 NLRC5Q86WI3 1866 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 HHLA1C9JL84 531 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 PRPSAP2O60256 369 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 ZMYND10O75800 440 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
APTR-204ENST00000440088 AMHP03971 560 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 GLI1P08151 1106 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 FGFR3P22607 806 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 PBX3P40426 434 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 YWHAZP63104 245 aaKnown RBP20.59■□□□□ 0.89
APTR-204ENST00000440088 SIX1Q15475 284 aaPredicted RBP20.59■□□□□ 0.89
APTR-204ENST00000440088 CYP1B1Q16678 543 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 SLC39A12Q504Y0 691 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 KCNT1Q5JUK3 1230 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 ZNF280DQ6N043 979 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 RAPGEF5Q92565 580 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 MAGOHBQ96A72 148 aaKnown RBP20.59■□□□□ 0.89
APTR-204ENST00000440088 DDX23Q9BUQ8 820 aaKnown RBP20.59■□□□□ 0.89
APTR-204ENST00000440088 HEMGNQ9BXL5 484 aa20.59■□□□□ 0.89
APTR-204ENST00000440088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.59■□□□□ 0.89
APTR-204ENST00000440088 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.59■□□□□ 0.89
APTR-204ENST00000440088 MATKP42679 507 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 RABGGTBP53611 331 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 KLF1Q13351 362 aaPredicted RBP20.58■□□□□ 0.89
APTR-204ENST00000440088 MRPL58Q14197 206 aaKnown RBP20.58■□□□□ 0.89
APTR-204ENST00000440088 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
APTR-204ENST00000440088 CTXN3Q4LDR2 81 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 TFDP3Q5H9I0 405 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 TMCO3Q6UWJ1 677 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 MFSD7Q6UXD7 560 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 GPRIN1Q7Z2K8 1008 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 HNRNPLLQ8WVV9 542 aaKnown RBP20.58■□□□□ 0.89
APTR-204ENST00000440088 ACSF2Q96CM8 615 aaPredicted RBP20.58■□□□□ 0.89
APTR-204ENST00000440088 ULBP1Q9BZM6 244 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 ARFGAP3Q9NP61 516 aa20.58■□□□□ 0.89
APTR-204ENST00000440088 OR4Q2P0C623 313 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 PTPN7P35236 360 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 DAOAP59103 153 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 SPOCD1Q6ZMY3 1216 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 TMEM173Q86WV6 379 aaPredicted RBP20.58■□□□□ 0.88
APTR-204ENST00000440088 C12orf50Q8NA57 414 aaPredicted RBP20.58■□□□□ 0.88
APTR-204ENST00000440088 NDRG1Q92597 394 aaKnown RBP20.58■□□□□ 0.88
APTR-204ENST00000440088 HINFPQ9BQA5 517 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 HERPUD2Q9BSE4 406 aa20.58■□□□□ 0.88
APTR-204ENST00000440088 C11orf84Q9BUA3 381 aaPredicted RBP20.58■□□□□ 0.88
APTR-204ENST00000440088 OR6C75A6NL08 312 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 DAB1O75553 588 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 ZBED1O96006 694 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 GUCY2DQ02846 1103 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 DHX34Q14147 1143 aaKnown RBP20.57■□□□□ 0.88
APTR-204ENST00000440088 ANKS1BQ7Z6G8 1248 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 IFT20Q8IY31 132 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 CENPIQ92674 756 aaPredicted RBP20.57■□□□□ 0.88
APTR-204ENST00000440088 FUBP3Q96I24 572 aaKnown RBP eCLIP20.57■□□□□ 0.88
APTR-204ENST00000440088 RUNDC3BQ96NL0 473 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 PLEKHA4Q9H4M7 779 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 LRRC19Q9H756 370 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 POPDC2Q9HBU9 364 aa20.57■□□□□ 0.88
APTR-204ENST00000440088 TJP3O95049 919 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 CDKN2BP42772 138 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 WDR5P61964 334 aaKnown RBP20.56■□□□□ 0.88
APTR-204ENST00000440088 DR1Q01658 176 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 RAB6CQ53S08 254 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 BOLA3Q53S33 107 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 SCYL2Q6P3W7 929 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 CCDC137Q6PK04 289 aaKnown RBP20.56■□□□□ 0.88
APTR-204ENST00000440088 DEFB106AQ8N104 65 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 KCTD6Q8NC69 237 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 CMASQ8NFW8 434 aaPredicted RBP20.56■□□□□ 0.88
APTR-204ENST00000440088 B3GALT6Q96L58 329 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 PEBP4Q96S96 227 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 RAB6CQ9H0N0 254 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 CWH43Q9H720 699 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 EPB41L5Q9HCM4 733 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 HOMER3Q9NSC5 361 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 PCYOX1Q9UHG3 505 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 C3orf70A6NLC5 250 aaPredicted RBP20.56■□□□□ 0.88
APTR-204ENST00000440088 USP17L7P0C7H9 530 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 KDELR1P24390 212 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 CYP2F1P24903 491 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 NOS2P35228 1153 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 GRIK1P39086 918 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 FNTAP49354 379 aa20.56■□□□□ 0.88
APTR-204ENST00000440088 HDAC4P56524 1084 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms