RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CITO14578 2027 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SCN1AP35498 2009 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 TDRD15B5MCY1 1934 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 A0A0B4J269 797 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ERICH4A6NGS2 130 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 C5orf67F2Z3F1 127 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CLASP2O75122 1294 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SOD2P04179 222 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ADRB2P07550 413 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CLTAP09496 248 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CTSAP10619 480 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MCF2P10911 925 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CD58P19256 250 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NR1D1P20393 614 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ELF1P32519 619 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 GRM5P41594 1212 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CARSP49589 748 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NUMBP49757 651 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MXI1P50539 228 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CDH8P55286 799 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CDR2Q01850 454 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 DUSP4Q13115 394 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SNRNP35Q16560 246 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 WDR72Q3MJ13 1102 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MGAT5BQ3V5L5 792 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CBWD6Q4V339 395 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SLC39A12Q504Y0 691 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CBWD3Q5JTY5 395 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CBWD5Q5RIA9 395 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 VARS2Q5ST30 1063 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SEL1L2Q5TEA6 688 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 LIN9Q5TKA1 542 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 WSCD1Q658N2 575 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SLFN12LQ6IEE8 588 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SYCE2Q6PIF2 218 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 C15orf39Q6ZRI6 1047 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 TSEN2Q8NCE0 465 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SMG7Q92540 1137 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CD101Q93033 1021 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NT5C1BQ96P26 610 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 KLHL5Q96PQ7 755 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PPP1R10Q96QC0 940 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ZSWIM1Q9BR11 485 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CORO1BQ9BR76 489 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ERP44Q9BS26 406 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 EMILIN2Q9BXX0 1053 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NFKBIZQ9BYH8 718 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PHACTR1Q9C0D0 580 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ZBP1Q9H171 429 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 TMEM134Q9H6X4 195 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PPCSQ9HAB8 311 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NGRNQ9NPE2 291 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 DPP3Q9NY33 737 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MTRF1LQ9UGC7 380 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CD207Q9UJ71 328 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NOCTQ9UK39 431 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PCDHA3Q9Y5H8 950 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CACNA1IQ9P0X4 2223 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 C5orf60A6NFR6 353 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF233A6NK53 670 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ABLIM1O14639 778 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 BUB1BO60566 1050 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 ATP2C2O75185 946 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CST3P01034 146 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 ADH1AP07327 375 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 C8AP07357 584 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CXCR5P32302 372 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MDH1P40925 334 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 GCLMP48507 274 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 YWHAHQ04917 246 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 MCL1Q07820 350 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ADCY2Q08462 1091 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 DSC1Q08554 894 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ADAM15Q13444 863 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 BYSLQ13895 437 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 TAF12Q16514 161 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 TTMPQ5BVD1 217 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 C1orf220Q5T0J3 134 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PHLDB3Q6NSJ2 640 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CRELD2Q6UXH1 353 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 TRMT10CQ7L0Y3 403 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 TMC3Q7Z5M5 1100 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 DDX53Q86TM3 631 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 RELL1Q8IUW5 271 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 SCN4BQ8IWT1 228 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 KREMEN2Q8NCW0 462 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 FBXL13Q8NEE6 735 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CCHCR1Q8TD31 782 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 GRK7Q8WTQ7 553 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MCRS1Q96EZ8 462 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MS4A14Q96JA4 679 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 SAMD11Q96NU1 681 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CLSTN3Q9BQT9 956 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 SMG9Q9H0W8 520 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 CCDC134Q9H6E4 229 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 LRRC19Q9H756 370 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 UBN1Q9NPG3 1134 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 WHRNQ9P202 907 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CNTN6Q9UQ52 1028 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CNOT1A5YKK6 2376 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms