RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 HHIPQ96QV1 700 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 COMMD8Q9NX08 183 aa19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 CHORDC1Q9UHD1 332 aaPredicted RBP19.56■□□□□ 0.72
AC004540.1-201ENST00000439120 MYH10P35580 1976 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 SCAMP3O14828 347 aaKnown RBP19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 AKAP3O75969 853 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 ADH1CP00326 375 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 TRIM49P0CI25 452 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 TRIM49CP0CI26 452 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 HOXC13P31276 330 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 PSMC2P35998 433 aaKnown RBP19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 ASPAP45381 313 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 GCLMP48507 274 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 ADAM9Q13443 819 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 NFIL3Q16649 462 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 PAQR9Q6ZVX9 377 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 SYT13Q7L8C5 426 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 CACNA2D4Q7Z3S7 1137 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 SCAMP5Q8TAC9 235 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 GDPD2Q9HCC8 539 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 FAM49BQ9NUQ9 324 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 TBC1D14Q9P2M4 693 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 SH3BP1Q9Y3L3 701 aa19.55■□□□□ 0.72
AC004540.1-201ENST00000439120 GOLGA6L4A6NEF3 574 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 COCHO43405 550 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 CYP17A1P05093 508 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 FAM200BP0CF97 657 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 TGM1P22735 817 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 SEC13P55735 322 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 MAP3K7CLP57077 242 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 DMC1Q14565 340 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 CRYBG2Q8N1P7 616 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 FBXO44Q9H4M3 255 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 GMIPQ9P107 970 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 HMGXB4Q9UGU5 601 aa19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.54■□□□□ 0.72
AC004540.1-201ENST00000439120 RALGAPA1Q6GYQ0 2036 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 E2F8A0AVK6 867 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 TNFRSF10BO14763 440 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 AXIN1O15169 862 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 FOXD2O60548 495 aaPredicted RBP19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 APBB3O95704 486 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 ADORA2BP29275 332 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 OPRD1P41143 372 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 TUBP50607 506 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 BECN1Q14457 450 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 DHCR24Q15392 516 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 CSRP2Q16527 193 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 C2orf27AQ580R0 203 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 C1orf220Q5T0J3 134 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 ADGRG2Q8IZP9 1017 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 C12orf29Q8N999 325 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 TAS1R2Q8TE23 839 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 EZH1Q92800 747 aaPredicted RBP19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 NT5C1AQ9BXI3 368 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 CYP3A43Q9HB55 503 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 TLR8Q9NR97 1041 aaKnown RBP19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 POLR3BQ9NW08 1133 aaPredicted RBP19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 MYO16Q9Y6X6 1858 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 KIAA1549LQ6ZVL6 1849 aa19.53■□□□□ 0.72
AC004540.1-201ENST00000439120 ADH5P11766 374 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 CD58P19256 250 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 ENPEPQ07075 957 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 SNX30Q5VWJ9 437 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 TSTD1Q8NFU3 115 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 JAKMIP2Q96AA8 810 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 OTUB2Q96DC9 234 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 SMOQ99835 787 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 RTKNQ9BST9 563 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 NIF3L1Q9GZT8 377 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 CCSER2Q9H7U1 834 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 TMEM8AQ9HCN3 771 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 RMND1Q9NWS8 449 aa19.52■□□□□ 0.72
AC004540.1-201ENST00000439120 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 BEST1O76090 585 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 IRF1P10914 325 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 EPB41P11171 864 aaKnown RBP19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 ATXN1P54253 815 aaKnown RBP19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 PPP3CAQ08209 521 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 INCA1Q0VD86 236 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 EDRF1Q3B7T1 1238 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 KBTBD6Q86V97 674 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 C12orf50Q8NA57 414 aaPredicted RBP19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 USP33Q8TEY7 942 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 CYFIP2Q96F07 1278 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 LOXL4Q96JB6 756 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 PNKPQ96T60 521 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 ARRDC1-AS1Q9H2J1 176 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 CSNK1G1Q9HCP0 422 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 IL37Q9NZH6 218 aa19.51■□□□□ 0.71
AC004540.1-201ENST00000439120 MED19A0JLT2 244 aaPredicted RBP19.5■□□□□ 0.71
AC004540.1-201ENST00000439120 FAM92AA1XBS5 289 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms