RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 VSTM1Q6UX27 236 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 PSMB7Q99436 277 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 CARD9Q9H257 536 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 CNGB3Q9NQW8 809 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 TMEM30AQ9NV96 361 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 ASNSD1Q9NWL6 643 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 HCN4Q9Y3Q4 1203 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 PCDHB12Q9Y5F1 795 aa12.98□□□□□ -0.33
HLA-DOB-206ENST00000438763 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 GRXCR1A8MXD5 290 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 DPYSL4O14531 572 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 CYP2F1P24903 491 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 PSMA2P25787 234 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 PAFAH1B1P43034 410 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 DNA2P51530 1060 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 TKTL1P51854 596 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 DSG1Q02413 1049 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RASIP1Q5U651 963 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 LRRC38Q5VT99 294 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 KIAA1841Q6NSI8 718 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 PRSS55Q6UWB4 352 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 CPNE8Q86YQ8 564 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RHOT1Q8IXI2 618 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SIX6OS1Q8N1H7 587 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SCML4Q8N228 414 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RASGEF1CQ8N431 466 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 EMC1Q8N766 993 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 KRT35Q92764 455 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 CLP1Q92989 425 aaKnown RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 C8orf48Q96LL4 319 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 CNPY3Q9BT09 278 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 RHOBTB2Q9BYZ6 727 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-DOB-206ENST00000438763 F8VP50 259 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 PSTPIP1O43586 416 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 HSF2BPO75031 334 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 RNF8O76064 485 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CPB1P15086 417 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 PDGFRAP16234 1089 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 ATP2A2P16615 1042 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 IGFBP4P22692 258 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 GRIK1P39086 918 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 GLUD2P49448 558 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 NDUFV1P49821 464 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CDR1P51861 262 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 RWDD2BP57060 319 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 DAOAP59103 153 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 KRT17Q04695 432 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 TAF5Q15542 800 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 PSMD5Q16401 504 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CCDC181Q5TID7 509 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 PM20D1Q6GTS8 502 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 ACTRT1Q8TDG2 376 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 RPGRIP1Q96KN7 1286 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CAPZA3Q96KX2 299 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 USP3Q9Y6I4 520 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 CHD9Q3L8U1 2897 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
HLA-DOB-206ENST00000438763 REV3LO60673 3130 aa12.96□□□□□ -0.34
HLA-DOB-206ENST00000438763 CTAGE15A4D2H0 777 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TNFRSF10BO14763 440 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TRIM66O15016 1216 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 TLL1O43897 1013 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 CEP104O60308 925 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 GRAP2O75791 330 aa12.95□□□□□ -0.34
HLA-DOB-206ENST00000438763 ZBED1O96006 694 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms