RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PPEF2O14830 753 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 LRCH4O75427 683 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ERBB2P04626 1255 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 TAP1Q03518 808 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 CRYMQ14894 314 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 FASTKD3Q14CZ7 662 aaKnown RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ALKAL1Q6UXT8 129 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ALLCQ8N6M5 410 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ANKS4BQ8N8V4 417 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 SLC4A11Q8NBS3 891 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ZNF784Q8NCA9 323 aaPredicted RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 SAYSD1Q9NPB0 183 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 CNTN3Q9P232 1028 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 PCSK1NQ9UHG2 260 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 STRIP2Q9ULQ0 834 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 TRIM33Q9UPN9 1127 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 HMGCRP04035 888 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 PECAM1P16284 738 aaPredicted RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 MAGEA4P43358 317 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 LMNB2Q03252 620 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 NAIF1Q69YI7 327 aaPredicted RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 SERINC5Q86VE9 423 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 TAB3Q8N5C8 712 aaPredicted RBP14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 KLHDC9Q8NEP7 349 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 ELOVL4Q9GZR5 314 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 CYP3A43Q9HB55 503 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 TRPV2Q9Y5S1 764 aa14.53□□□□□ -0.08
PTCHD3-201ENST00000438700 BRCA2P51587 3418 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 M0QYV0 167 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 DNALI1O14645 258 aaPredicted RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 MED7O43513 233 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 CILPO75339 1184 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 CD48P09326 243 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 APLP1P51693 650 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 VCPP55072 806 aaKnown RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 SLC25A11Q02978 314 aaKnown RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 ZBTB6Q15916 424 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 TWF2Q6IBS0 349 aaKnown RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 CCSAPQ6IQ19 270 aaPredicted RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 VSTM1Q6UX27 236 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 RSPH3Q86UC2 560 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 SRRM1Q8IYB3 904 aaKnown RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 ZCCHC9Q8N567 271 aaKnown RBP14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 NIPA2Q8N8Q9 360 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 CFHR5Q9BXR6 569 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 EBF2Q9HAK2 575 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 IPPQ9Y573 584 aa14.52□□□□□ -0.08
PTCHD3-201ENST00000438700 C3orf70A6NLC5 250 aaPredicted RBP14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 SIGLEC16A6NMB1 481 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 UPP2O95045 317 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 STAU1O95793 577 aaKnown RBP14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 HOXD10P28358 340 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 TAF5Q15542 800 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 OASLQ15646 514 aaKnown RBP14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 XYLT1Q86Y38 959 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 BEST2Q8NFU1 509 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 GDAP1Q8TB36 358 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 UBA3Q8TBC4 463 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 LHX5Q9H2C1 402 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 DDX56Q9NY93 547 aaKnown RBP14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 SAMD15Q9P1V8 674 aa14.52□□□□□ -0.09
PTCHD3-201ENST00000438700 CST8O60676 142 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 BANF1O75531 89 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 MICAL2O94851 1124 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 CHRNA1P02708 482 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 CST5P28325 142 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 COPS2P61201 443 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 NCALDP61601 193 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 MTM1Q13496 603 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 SMG8Q8ND04 991 aaKnown RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 ACTL9Q8TC94 416 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 RAET1EQ8TD07 263 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 P3H4Q92791 437 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 HEXIM2Q96MH2 286 aaKnown RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 FGFR1OP2Q9NVK5 253 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 NAALADL1Q9UQQ1 740 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 STK38LQ9Y2H1 464 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 SMIM28A0A1B0GU29 152 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 DIAPH2O60879 1101 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 BRAFP15056 766 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 ATP5DP30049 168 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 GDF10P55107 478 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 OTUD4Q01804 1114 aaKnown RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 MPP2Q14168 576 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 TMED2Q15363 201 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM182AQ5T1J6 154 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 MAP3K21Q5TCX8 1036 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 SMYD5Q6GMV2 418 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 DRICH1Q6PGQ1 229 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 ARRDC4Q8NCT1 418 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 HSPH1Q92598 858 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 TMEM176AQ96HP8 235 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 ZNF570Q96NI8 536 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 SENP6Q9GZR1 1112 aaPredicted RBP14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 UBQLN1Q9UMX0 589 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms