RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C1orf210Q8IVY1 113 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 EHBP1Q8NDI1 1231 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 TTC8Q8TAM2 541 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 LMO3Q8TAP4 145 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 ATP2A3Q93084 1043 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 JAKMIP2Q96AA8 810 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 RNF38Q9H0F5 515 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 EBF3Q9H4W6 596 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 HPS4Q9NQG7 708 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 DUS2Q9NX74 493 aaKnown RBP26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 GMIPQ9P107 970 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 KIAA1257Q9ULG3 409 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 SCML2Q9UQR0 700 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 CPQQ9Y646 472 aa26.12■■□□□ 1.77
RAPGEF1-206ENST00000438647 HHLA1C9JL84 531 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 MBL2P11226 248 aaPredicted RBP26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 ACO1P21399 889 aaKnown RBP26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 SOX9P48436 509 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 GCNT1Q02742 428 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 SGO2Q562F6 1265 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 CT47A1Q5JQC4 288 aaPredicted RBP26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 TRIM68Q6AZZ1 485 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 FAM114A1Q8IWE2 563 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 CPA6Q8N4T0 437 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 UBR7Q8N806 425 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 ANKRD52Q8NB46 1076 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 MED15Q96RN5 788 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 IER2Q9BTL4 223 aa26.11■■□□□ 1.77
RAPGEF1-206ENST00000438647 LEFTY2O00292 366 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 CD19P15391 556 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 LRRC32Q14392 662 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 ZNF687Q8N1G0 1237 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 EXOC4Q96A65 974 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 UBXN6Q9BZV1 441 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 NACA2Q9H009 215 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 THAP9Q9H5L6 903 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 SPATA6Q9NWH7 488 aaPredicted RBP26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 HESX1Q9UBX0 185 aa26.1■■□□□ 1.77
RAPGEF1-206ENST00000438647 COCHO43405 550 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 PAEPP09466 180 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 VDRP11473 427 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 MTIF2P46199 727 aaKnown RBP26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 KIF11P52732 1056 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 TMEM270Q6UE05 265 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 GPRIN1Q7Z2K8 1008 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 GPT2Q8TD30 523 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 INTS2Q9H0H0 1204 aaKnown RBP26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 SMPD4Q9NXE4 827 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 PCDHB4Q9Y5E5 795 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 WNT6Q9Y6F9 365 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 PATJQ8NI35 1801 aa26.09■■□□□ 1.77
RAPGEF1-206ENST00000438647 HELZP42694 1942 aaKnown RBP26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 SLC9A3R1O14745 358 aaPredicted RBP26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 LAMTOR5O43504 91 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 TLR5O60602 858 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 NFATC1O95644 943 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 MBD3O95983 291 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 ARSAP15289 507 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 PSEN1P49768 467 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 BCAT1P54687 386 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 NR1H3Q13133 447 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 FZD5Q13467 585 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 TXNDC11Q6PKC3 985 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 FAM81BQ96LP2 452 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 CHRDQ9H2X0 955 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 ECT2Q9H8V3 914 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 LMAN1LQ9HAT1 526 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 TSPAN16Q9UKR8 245 aa26.08■■□□□ 1.77
RAPGEF1-206ENST00000438647 CHRNB1P11230 501 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 ZXDBP98169 803 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 GOLGA7BQ2TAP0 167 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 EML3Q32P44 896 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 DGKKQ5KSL6 1271 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 RRAGAQ7L523 313 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 CCDC186Q7Z3E2 898 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 IRF2BP1Q8IU81 584 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 CCSER2Q9H7U1 834 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 USP3Q9Y6I4 520 aa26.07■■□□□ 1.76
RAPGEF1-206ENST00000438647 CYP26A1O43174 497 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 PON2Q15165 354 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 STILQ15468 1287 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 GBP6Q6ZN66 633 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 ENOSF1Q7L5Y1 443 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 TADA2BQ86TJ2 420 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 PIGZQ86VD9 579 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 TTC30AQ86WT1 665 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 ARHGEF19Q8IW93 802 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 CYLDQ9NQC7 956 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 FAM86C1Q9NVL1 165 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 CFAP97Q9P2B7 532 aa26.06■■□□□ 1.76
RAPGEF1-206ENST00000438647 GTPBP10A4D1E9 387 aaKnown RBP26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 OTOL1A6NHN0 477 aaPredicted RBP26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 XPO1O14980 1071 aaKnown RBP26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 BST2Q10589 180 aaKnown RBP26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 RBM43Q6ZSC3 357 aaKnown RBP26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 KAT5Q92993 513 aa26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 TBC1D14Q9P2M4 693 aa26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 FBXO4Q9UKT5 387 aa26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 SH3BP1Q9Y3L3 701 aa26.05■■□□□ 1.76
RAPGEF1-206ENST00000438647 E2F8A0AVK6 867 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms