RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SQORQ9Y6N5 450 aa3.95□□□□□ -1.78
HMGB1P12-201ENST00000438594 A0A1W2PPL8 197 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 AQP12BA6NM10 295 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 AGAP14A8MT82 685 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 DDX39AO00148 427 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CYP27B1O15528 508 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CLASP2O75122 1294 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 FAM155BO75949 473 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 KIF20AO95235 890 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 IL18RAPO95256 599 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 NUDT3O95989 172 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 QDPRP09417 244 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CYP2A6P11509 494 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 SKILP12757 684 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 GAP43P17677 238 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 LSP1P33241 339 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 MTHFRP42898 656 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 MEOX1P50221 254 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 DNM2P50570 870 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 TKTL1P51854 596 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 ARFIP1P53367 373 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 SEC24CP53992 1094 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CREB5Q02930 508 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 BFSP1Q12934 665 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 EIF4A2Q14240 407 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 KIZQ2M2Z5 673 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 RABL6Q3YEC7 729 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CTXN3Q4LDR2 81 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 TOR2AQ5JU69 321 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 BTBD8Q5XKL5 378 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 LAIR1Q6GTX8 287 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC22A25Q6T423 547 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMTC3Q6ZXV5 915 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 LARP4Q71RC2 724 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZNF804AQ7Z570 1209 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLFN11Q7Z7L1 901 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 MTDHQ86UE4 582 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CHD1LQ86WJ1 897 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMPRSS6Q8IU80 811 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 ELOA2Q8IYF1 753 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 PLBD2Q8NHP8 589 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 PCDH19Q8TAB3 1148 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 WDR48Q8TAF3 677 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 KLHDC4Q8TBB5 520 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 DCAF4Q8WV16 495 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 RUBCNQ92622 972 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 BICD1Q96G01 975 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZNF764Q96H86 408 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 HEPHQ9BQS7 1158 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZDHHC5Q9C0B5 715 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 SENP6Q9GZR1 1112 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 EPS8L2Q9H6S3 715 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 PDE7BQ9NP56 450 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 USP36Q9P275 1121 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CHORDC1Q9UHD1 332 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 PRDM4Q9UKN5 801 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 HPCAL4Q9UM19 191 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 NOC2LQ9Y3T9 749 aaKnown RBP3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CEP83Q9Y592 693 aa3.94□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCDC196A0A1B0GTZ2 297 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 A8MVJ9 347 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 AP3D1O14617 1153 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 FOXN1O15353 648 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 TXNL1O43396 289 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 KDM1AO60341 852 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 DTNBO60941 627 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 BEST1O76090 585 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLU7O95391 586 aaKnown RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 SCGB1D1O95968 90 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 SNRNP70P08621 437 aaKnown RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 CSH1P0DML2 217 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 CSH2P0DML3 217 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 IFNAR1P17181 557 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 HLA-DPA1P20036 260 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCNCP24863 283 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMOD1P28289 359 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 DPP6P42658 865 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCR9P51686 369 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 C21orf58P58505 322 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 MRPS21P82921 87 aaKnown RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 SMAD3P84022 425 aaKnown RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 CYP4A11Q02928 519 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 UBE3AQ05086 875 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 DBPQ10586 325 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 MAP3K12Q12852 859 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 LRMPQ12912 555 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 SGCGQ13326 291 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 NFYCQ13952 458 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 PLS1Q14651 629 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 RRP1BQ14684 758 aaKnown RBP3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 NAA25Q14CX7 972 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 PCOLCEQ15113 449 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 ADIPOQQ15848 244 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMEM266Q2M3C6 531 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 MAJINQ3KP22 176 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 ADCK5Q3MIX3 580 aa3.93□□□□□ -1.78
HMGB1P12-201ENST00000438594 TTC39AQ5SRH9 613 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms