RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 OVCA2Q8WZ82 227 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SMARCD2Q92925 531 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SLC22A12Q96S37 553 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SLC46A2Q9BY10 475 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 ULBP1Q9BZM6 244 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SMG9Q9H0W8 520 aaKnown RBP17.02■□□□□ 0.32
SNRPB-202ENST00000438552 LRRC4Q9HBW1 653 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 CYTH4Q9UIA0 394 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 PCDHGC3Q9UN70 934 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 SCML2Q9UQR0 700 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 BDP1A6H8Y1 2624 aa17.02■□□□□ 0.32
SNRPB-202ENST00000438552 TTC28Q96AY4 2481 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 FAM170AA1A519 330 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 AP5Z1O43299 807 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 CBFA2T2O43439 604 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 GABBR2O75899 941 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 TPM3P06753 285 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 USP17L7P0C7H9 530 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 LCP1P13796 627 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.314e-8■■□□□ 14.1
SNRPB-202ENST00000438552 KRT9P35527 623 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 MON1AQ86VX9 555 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 SIX6OS1Q8N1H7 587 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 C1orf131Q8NDD1 294 aaKnown RBP17.01■□□□□ 0.31
SNRPB-202ENST00000438552 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
SNRPB-202ENST00000438552 KCNK12Q9HB15 430 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 CHORDC1Q9UHD1 332 aaPredicted RBP17.01■□□□□ 0.31
SNRPB-202ENST00000438552 MUTYHQ9UIF7 546 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 NOCTQ9UK39 431 aaKnown RBP17.01■□□□□ 0.31
SNRPB-202ENST00000438552 USP3Q9Y6I4 520 aa17.01■□□□□ 0.31
SNRPB-202ENST00000438552 A0A1W2PQH9 124 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 LRRC53A6NM62 1247 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 MMEP08473 750 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 ZDHHC11BP0C7U3 371 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 VIPR2P41587 438 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 PPP3CCP48454 512 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 TANGO2Q6ICL3 276 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 BHLHA9Q7RTU4 235 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 ARID3BQ8IVW6 561 aaPredicted RBP17■□□□□ 0.31
SNRPB-202ENST00000438552 CMTM8Q8IZV2 173 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 ARL14EPQ8N8R7 260 aaPredicted RBP17■□□□□ 0.31
SNRPB-202ENST00000438552 KCTD13Q8WZ19 329 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
SNRPB-202ENST00000438552 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.315e-8■□□□□ 10.2
SNRPB-202ENST00000438552 RSPRY1Q96DX4 576 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 CYP2S1Q96SQ9 504 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 RPP25Q9BUL9 199 aaKnown RBP17■□□□□ 0.31
SNRPB-202ENST00000438552 SMOC2Q9H3U7 446 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 CCSER2Q9H7U1 834 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 NMUR1Q9HB89 426 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 TLR8Q9NR97 1041 aaKnown RBP17■□□□□ 0.31
SNRPB-202ENST00000438552 ST7Q9NRC1 585 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 OSER1Q9NX31 292 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 MUC3AQ02505 3323 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
SNRPB-202ENST00000438552 NCOR1O75376 2440 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 COL4A2P08572 1712 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 ZBED1O96006 694 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 OAS1P00973 400 aaKnown RBP16.99■□□□□ 0.31
SNRPB-202ENST00000438552 CKMP06732 381 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 AVPR1AP37288 418 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 PDCLQ13371 301 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 E4F1Q66K89 784 aaPredicted RBP16.99■□□□□ 0.31
SNRPB-202ENST00000438552 SCD5Q86SK9 330 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 CLEC4CQ8WTT0 213 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 PLA2G2FQ9BZM2 168 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 TRPV4Q9HBA0 871 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 ZFP14Q9HCL3 533 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 IGSF9Q9P2J2 1179 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 TJP2Q9UDY2 1190 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 ZMYM5Q9UJ78 669 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 NAGPAQ9UK23 515 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 MYO6Q9UM54 1294 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 CEP83Q9Y592 693 aa16.99■□□□□ 0.31
SNRPB-202ENST00000438552 ITIH6Q6UXX5 1313 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 E5RJQ4 531 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 COCHO43405 550 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 ECI2O75521 394 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 GYPCP04921 128 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 FERP16591 822 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 CHRNB2P17787 502 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 DAOAP59103 153 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 FMO1Q01740 532 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 GRM2Q14416 872 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 SNX30Q5VWJ9 437 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 VITQ6UXI7 678 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 WDTC1Q8N5D0 677 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 USP13Q92995 863 aaPredicted RBP16.98■□□□□ 0.31
SNRPB-202ENST00000438552 ELSPBP1Q96BH3 223 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 HSFY1Q96LI6 401 aa16.98■□□□□ 0.31
SNRPB-202ENST00000438552 CPXM1Q96SM3 734 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms