RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 IFNAR2P48551 515 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 COPB1P53618 953 aaKnown RBP11.16□□□□□ -0.62
LINC00475-207ENST00000438322 USP46P62068 366 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 SATB1Q01826 763 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 FZD5Q13467 585 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 MAPRE1Q15691 268 aaKnown RBP11.16□□□□□ -0.62
LINC00475-207ENST00000438322 CFAP221Q4G0U5 840 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 FAM171BQ6P995 826 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 PRR23BQ6ZRT6 265 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 MYCBPAPQ8TBZ2 947 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 JAKMIP2Q96AA8 810 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC00475-207ENST00000438322 FAM81BQ96LP2 452 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 ZNF518BQ9C0D4 1074 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 CYP3A43Q9HB55 503 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 TRPV5Q9NQA5 729 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 GCNT4Q9P109 453 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 LIMA1Q9UHB6 759 aaKnown RBP11.16□□□□□ -0.62
LINC00475-207ENST00000438322 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
LINC00475-207ENST00000438322 CEP250Q9BV73 2442 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 CHRNB1P11230 501 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 HDCP19113 662 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 TBXAS1P24557 533 aaPredicted RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 MAGEA11P43364 429 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 CCR3P51677 355 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 CACNA2D1P54289 1103 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 UBXN1Q04323 297 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 LRMPQ12912 555 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 RUNX3Q13761 415 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 MTF1Q14872 753 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 RALGPS2Q86X27 583 aaPredicted RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 RIN3Q8TB24 985 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 TATDN2Q93075 761 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 TRMT2BQ96GJ1 504 aaKnown RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 TNIP3Q96KP6 325 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 B3GNT5Q9BYG0 378 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 FAM124BQ9H5Z6 455 aaPredicted RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 HPS4Q9NQG7 708 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 ZSCAN32Q9NX65 697 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 DUS2Q9NX74 493 aaKnown RBP11.15□□□□□ -0.62
LINC00475-207ENST00000438322 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 OBP2AQ9NY56 170 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 TRPM5Q9NZQ8 1165 aa11.15□□□□□ -0.62
LINC00475-207ENST00000438322 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 CHURC1-FNTBB4DL54 471 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 TRIM66O15016 1216 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 CCDC130P13994 396 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 HOXC13P31276 330 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 CXCL12P48061 93 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 FNTBP49356 437 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 MFAP3P55082 362 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 DMWDQ09019 674 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 GAS6Q14393 721 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 PPP2R5DQ14738 602 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 NAIF1Q69YI7 327 aaPredicted RBP11.14□□□□□ -0.63
LINC00475-207ENST00000438322 VSTM1Q6UX27 236 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 LIMS2Q7Z4I7 341 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 ACOT1Q86TX2 421 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 ELOVL4Q9GZR5 314 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 SDCBP2Q9H190 292 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 KIF9Q9HAQ2 790 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 APOBEC3GQ9HC16 384 aaKnown RBP11.14□□□□□ -0.63
LINC00475-207ENST00000438322 FAM49BQ9NUQ9 324 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 TMEM30AQ9NV96 361 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 C2orf42Q9NWW7 574 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 ZMYM5Q9UJ78 669 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 RAB23Q9ULC3 237 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 SMG5Q9UPR3 1016 aaKnown RBP11.14□□□□□ -0.63
LINC00475-207ENST00000438322 PCDHGA2Q9Y5H1 932 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 SPAG17Q6Q759 2223 aa11.14□□□□□ -0.63
LINC00475-207ENST00000438322 OTOL1A6NHN0 477 aaPredicted RBP11.13□□□□□ -0.63
LINC00475-207ENST00000438322 LGALS16A8MUM7 142 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 TPM3P06753 285 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 MBL2P11226 248 aaPredicted RBP11.13□□□□□ -0.63
LINC00475-207ENST00000438322 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 CD58P19256 250 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 SLC9A1P19634 815 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 PON1P27169 355 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 ADORA2BP29275 332 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 ASPAP45381 313 aa11.13□□□□□ -0.63
LINC00475-207ENST00000438322 PXNP49023 591 aaPredicted RBP11.13□□□□□ -0.63
LINC00475-207ENST00000438322 TAF10Q12962 218 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms