RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 DEPDC1BQ8WUY9 529 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 DNASE1L2Q92874 299 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC35C1Q96A29 364 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 CHFRQ96EP1 664 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 CCDC34Q96HJ3 373 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SPATA17Q96L03 361 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 KCNK16Q96T55 309 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SMOQ99835 787 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 TTLL2Q9BWV7 592 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 GPR88Q9GZN0 384 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 LTB4R2Q9NPC1 389 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM49BQ9NUQ9 324 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 GCNT4Q9P109 453 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 CTNND2Q9UQB3 1225 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SDK1Q7Z5N4 2213 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 SPTBN4Q9H254 2564 aa9.08□□□□□ -0.96
HERPUD2-206ENST00000438224 FRYLO94915 3013 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 KANSL1LA0AUZ9 987 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 PSMA7O14818 248 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CHADO15335 359 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC16A3O15427 465 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CILPO75339 1184 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CLSTN1O94985 981 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CD58P19256 250 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 ANP32AP39687 249 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 PGFP49763 221 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 ZXDBP98169 803 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 PFKPQ01813 784 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 PRKCQQ04759 706 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TNK2Q07912 1038 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TAF12Q16514 161 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 KRT39Q6A163 491 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TXNDC11Q6PKC3 985 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 BRICD5Q6PL45 260 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 DENND5BQ6ZUT9 1274 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 GPRIN1Q7Z2K8 1008 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CRYBG2Q8N1P7 616 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 DTWD2Q8NBA8 298 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 SCAMP5Q8TAC9 235 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 NELFBQ8WX92 580 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 MRPS31Q92665 395 aaKnown RBP9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TAF4BQ92750 862 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM122AQ96E09 287 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 DHTKD1Q96HY7 919 aaPredicted RBP9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 C8orf48Q96LL4 319 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 GCNAQ96QF7 691 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 CYP2S1Q96SQ9 504 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 TSG101Q99816 390 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 ELOVL4Q9GZR5 314 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 HPS4Q9NQG7 708 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 OBP2AQ9NY56 170 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 GTSE1Q9NYZ3 720 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 COQ4Q9Y3A0 265 aa9.07□□□□□ -0.96
HERPUD2-206ENST00000438224 OTOL1A6NHN0 477 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 HHLA1C9JL84 531 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF263O14978 683 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 GTF2H1P32780 548 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 PTPN5P54829 565 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 IFRD2Q12894 506 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TAF10Q12962 218 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 USP4Q13107 963 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 UBXN2BQ14CS0 331 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF77Q15935 545 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 DCAF17Q5H9S7 520 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TCERG1LQ5VWI1 586 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TRIM68Q6AZZ1 485 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 UNC93AQ86WB7 457 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 MAML2Q8IZL2 1156 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 CELF5Q8N6W0 485 aaKnown RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 UBR7Q8N806 425 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 ARL14EPQ8N8R7 260 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 FBXL13Q8NEE6 735 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TTC8Q8TAM2 541 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC2A14Q8TDB8 520 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 BPIFB1Q8TDL5 484 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 IRF7Q92985 503 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 E2F7Q96AV8 911 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM83CQ9BQN1 747 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 ARHGAP9Q9BRR9 750 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC4A5Q9BY07 1137 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 RNF38Q9H0F5 515 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TRPC7Q9HCX4 862 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TRPV5Q9NQA5 729 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 TDP1Q9NUW8 608 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 RAB20Q9NX57 234 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 IL37Q9NZH6 218 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 UXTQ9UBK9 157 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 HOOK1Q9UJC3 728 aaKnown RBP9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 SIT1Q9Y3P8 196 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 PIAS3Q9Y6X2 628 aa9.06□□□□□ -0.96
HERPUD2-206ENST00000438224 USP34Q70CQ2 3546 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms