RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 IKBKBO14920 756 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 AXIN1O15169 862 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 MAPK13O15264 365 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 COCHO43405 550 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 GREM1O60565 184 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 BEST1O76090 585 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 RHOBTB3O94955 611 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ZNF806P0C7X5 589 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 HNRNPLP14866 589 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 YWHAQP27348 245 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ASPAP45381 313 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 MAP1BP46821 2468 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TUBP50607 506 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 LIMK1P53667 647 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 NR1H3Q13133 447 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DHCR24Q15392 516 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PLK5Q496M5 336 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ZNF667Q5HYK9 610 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CEP68Q76N32 757 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 RASSF3Q86WH2 238 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 C12orf40Q86WS4 652 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 WBP2Q969T9 261 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SLITRK1Q96PX8 696 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SMOQ99835 787 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DUSP15Q9H1R2 295 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 EXOC1Q9NV70 894 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PLXND1Q9Y4D7 1925 aa15.3■□□□□ 0.04
TNFRSF1A-203ENST00000437813 MYH10P35580 1976 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 FOXD2O60548 495 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PHACTR2O75167 634 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 RTN3O95197 1032 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 APBB3O95704 486 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 EIF2DP41214 584 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SLC5A3P53794 718 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 INCA1Q0VD86 236 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DPYDQ12882 1025 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 BIRC3Q13489 604 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ZCWPW2Q504Y3 356 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SCARA5Q6ZMJ2 495 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ACOT1Q86TX2 421 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ETFBKMTQ8IXQ9 262 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PDZD8Q8NEN9 1154 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TAF4BQ92750 862 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ACDQ96AP0 544 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SMARCD1Q96GM5 515 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ARRDC1-AS1Q9H2J1 176 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DMAP1Q9NPF5 467 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 USP24Q9UPU5 2620 aa15.29■□□□□ 0.04
TNFRSF1A-203ENST00000437813 E2F8A0AVK6 867 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 KIR2DL1P43626 348 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SLC6A11P48066 632 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 NDUFA8P51970 172 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 NDST1P52848 882 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 UNC93AQ86WB7 457 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TTC16Q8NEE8 873 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 WHAMMQ8TF30 809 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 FBXO32Q969P5 355 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 EXOC4Q96A65 974 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TNIP3Q96KP6 325 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TWNKQ96RR1 684 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CCSER2Q9H7U1 834 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 COMMD8Q9NX08 183 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 MMP17Q9ULZ9 603 aa15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TNRC6BQ9UPQ9 1833 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SLC9A3R1O14745 358 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DCLK1O15075 740 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CCDC130P13994 396 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ENPEPQ07075 957 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 PPP3CAQ08209 521 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 ORC1Q13415 861 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 CCDC6Q16204 474 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 TMEM92Q6UXU6 159 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 GPRIN1Q7Z2K8 1008 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 IL17RCQ8NAC3 791 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 OLIG1Q8TAK6 271 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 SPATA32Q96LK8 384 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 GOLPH3LQ9H4A5 285 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 GMIPQ9P107 970 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 HCN2Q9UL51 889 aa15.27■□□□□ 0.04
TNFRSF1A-203ENST00000437813 GON4LQ3T8J9 2241 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms