RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-204ENST00000436978 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 RPS6KL1Q9Y6S9 549 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MST1RQ04912 1400 aa16.4■□□□□ 0.22
PTPN13-204ENST00000436978 MAGEB16A2A368 324 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 AMHP03971 560 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 MAP3K7CLP57077 242 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 CSTF3Q12996 717 aaKnown RBP16.39■□□□□ 0.22
PTPN13-204ENST00000436978 ANKS6Q68DC2 871 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 TEX9Q8N6V9 391 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 FAM172AQ8WUF8 416 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 CCDC134Q9H6E4 229 aa16.39■□□□□ 0.22
PTPN13-204ENST00000436978 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.22
PTPN13-204ENST00000436978 TCHHQ07283 1943 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 SGPL1O95470 568 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 S100A5P33763 92 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 CAPZA2P47755 286 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 NEK2P51955 445 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 MON2Q7Z3U7 1717 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 HSPA13P48723 471 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 TRPM8Q7Z2W7 1104 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 LRRC40Q9H9A6 602 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 LNPEPQ9UIQ6 1025 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 ARP10275 920 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 AVPR1AP37288 418 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 MCL1Q07820 350 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 PAN2Q504Q3 1202 aaKnown RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 PLD3Q8IV08 490 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 KCNV2Q8TDN2 545 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 TAF2Q6P1X5 1199 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 COPS7BQ9H9Q2 264 aaPredicted RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 MARCOQ9UEW3 520 aaPredicted RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 PLA2G4CQ9UP65 541 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 F8VZ95 297 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 RHOCP08134 193 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 PSMA4P25789 261 aaKnown RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 CHI3L1P36222 383 aaPredicted RBP16.39■□□□□ 0.21
PTPN13-204ENST00000436978 SGO1Q5FBB7 561 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 MROH9Q5TGP6 573 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 CHST12Q9NRB3 414 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
PTPN13-204ENST00000436978 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 GPRC5CQ9NQ84 441 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 DYRK1BQ9Y463 629 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 H3BRB1 525 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 HERVK_113P62684 666 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 STX5Q13190 355 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 TRIM69Q86WT6 500 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 ECSITQ9BQ95 431 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 TUT1Q9H6E5 874 aaKnown RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 VPS28Q9UK41 221 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 AP4E1Q9UPM8 1137 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 SLC22A9Q8IVM8 553 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 SCN3BQ9NY72 215 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 MYOM1P52179 1685 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 ITGALP20701 1170 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 PTPN7P35236 360 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 LRRC6Q86X45 466 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 XPO6Q96QU8 1125 aaKnown RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 CISHQ9NSE2 258 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FAM205AQ6ZU69 1335 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FGFR2P21802 821 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 USP50Q70EL3 339 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 SEC16BQ96JE7 1060 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 OSBPL1AQ9BXW6 950 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FOXN3O00409 490 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 AIM2O14862 343 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 C11orf63Q6NUN7 778 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 ERAP2Q6P179 960 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 EFEMP1Q12805 493 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 SYTL5Q8TDW5 730 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-204ENST00000436978 DDI1Q8WTU0 396 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 KCNB2Q92953 911 aa16.38■□□□□ 0.21
PTPN13-204ENST00000436978 FAM47E-STBD1D6RA91 191 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
PTPN13-204ENST00000436978 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 ADCK1Q86TW2 530 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 ACTRT1Q8TDG2 376 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 KCTD10Q9H3F6 313 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 SYTL2Q9HCH5 934 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 RAD54BQ9Y620 910 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 BCL9O00512 1426 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 SNTNA6NMZ2 147 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 HMGB3O15347 200 aaKnown RBP16.37■□□□□ 0.21
PTPN13-204ENST00000436978 CCR1P32246 355 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 PPIL2Q13356 520 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 MAN1C1Q9NR34 630 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 COPAP53621 1224 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms