RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 LIMK1P53667 647 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 IFRD2Q12894 506 aaPredicted RBP21.46■■□□□ 1.03
COL6A2-206ENST00000436769 ZACNQ401N2 412 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 FAM35AQ86V20 835 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 SFTPA1Q8IWL2 248 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 FUKQ8N0W3 1084 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 SPRYD3Q8NCJ5 442 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 CCDC26Q8TAB7 109 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 EXOC1Q9NV70 894 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 HPSEQ9Y251 543 aa21.46■■□□□ 1.03
COL6A2-206ENST00000436769 THADAQ6YHU6 1953 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 MAP1BP46821 2468 aaKnown RBP21.45■■□□□ 1.02
COL6A2-206ENST00000436769 A0A0A0MRY4 1105 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 A0A1B0GVL5 298 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 SLC9A3R1O14745 358 aaPredicted RBP21.45■■□□□ 1.02
COL6A2-206ENST00000436769 COCHO43405 550 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 ZDHHC11BP0C7U3 371 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 MBL2P11226 248 aaPredicted RBP21.45■■□□□ 1.02
COL6A2-206ENST00000436769 CMA1P23946 247 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 SEC13P55735 322 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 C2orf27AQ580R0 203 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 PPM1JQ5JR12 505 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 C1orf220Q5T0J3 134 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 SCARA5Q6ZMJ2 495 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 RASSF3Q86WH2 238 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 PDZD8Q8NEN9 1154 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 ZMIZ2Q8NF64 920 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 FBXO32Q969P5 355 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 TNIP3Q96KP6 325 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 CNTNAP3BQ96NU0 1288 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 CNTNAP3Q9BZ76 1288 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 GON4LQ3T8J9 2241 aa21.45■■□□□ 1.02
COL6A2-206ENST00000436769 NR3C1P04150 777 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 PFKFB1P16118 471 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 SLC5A3P53794 718 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 SGSM1Q2NKQ1 1148 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 AASDHQ4L235 1098 aaPredicted RBP21.44■■□□□ 1.02
COL6A2-206ENST00000436769 SV2AQ7L0J3 742 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 ACOT1Q86TX2 421 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 C12orf40Q86WS4 652 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 CRYBG2Q8N1P7 616 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 TMC2Q8TDI7 906 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 CHAMP1Q96JM3 812 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 SMOQ99835 787 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 SMOC1Q9H4F8 434 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 DMAP1Q9NPF5 467 aaPredicted RBP21.44■■□□□ 1.02
COL6A2-206ENST00000436769 COMMD8Q9NX08 183 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 MMP17Q9ULZ9 603 aa21.44■■□□□ 1.02
COL6A2-206ENST00000436769 E2F8A0AVK6 867 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 BEST1O76090 585 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 RPN1P04843 607 aaKnown RBP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 HNRNPLP14866 589 aaKnown RBP eCLIP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 MPLP40238 635 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 EIF2DP41214 584 aaKnown RBP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 PGFP49763 221 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 DGKEP52429 567 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 MRPS21P82921 87 aaKnown RBP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 CRY1Q16526 586 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 HECTD3Q5T447 861 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 DDX42Q86XP3 938 aaKnown RBP eCLIP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 C12orf50Q8NA57 414 aaPredicted RBP21.43■■□□□ 1.02
COL6A2-206ENST00000436769 TSTD1Q8NFU3 115 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 SMARCD1Q96GM5 515 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 PNKPQ96T60 521 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 MED10Q9BTT4 135 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 CCSER2Q9H7U1 834 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 CSNK1G1Q9HCP0 422 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 HMGXB4Q9UGU5 601 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 USP25Q9UHP3 1055 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 ZDHHC9Q9Y397 364 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 ATP8B3O60423 1300 aa21.43■■□□□ 1.02
COL6A2-206ENST00000436769 IKBKBO14920 756 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 AP1G2O75843 785 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 ASS1P00966 412 aaKnown RBP21.42■■□□□ 1.02
COL6A2-206ENST00000436769 MYL1P05976 194 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 ASPAP45381 313 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 TUBP50607 506 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 NDST1P52848 882 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 ORC1Q13415 861 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 LY6G5CQ5SRR4 150 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 SPOPLQ6IQ16 392 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 TMEM92Q6UXU6 159 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 PHTF2Q8N3S3 785 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 CCDC33Q8N5R6 958 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 TAF4BQ92750 862 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 WBP2Q969T9 261 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 DUSP9Q99956 384 aaKnown RBP21.42■■□□□ 1.02
COL6A2-206ENST00000436769 VPS45Q9NRW7 570 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 GMIPQ9P107 970 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 TBC1D14Q9P2M4 693 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 TRAF3IP3Q9Y228 551 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 INVSQ9Y283 1065 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 CEP295Q9C0D2 2601 aa21.42■■□□□ 1.02
COL6A2-206ENST00000436769 FAM237AA0A1B0GTK4 181 aa21.41■■□□□ 1.02
COL6A2-206ENST00000436769 RHOBTB1O94844 696 aa21.41■■□□□ 1.02
COL6A2-206ENST00000436769 KAT7O95251 611 aa21.41■■□□□ 1.02
COL6A2-206ENST00000436769 CCDC130P13994 396 aa21.41■■□□□ 1.02
COL6A2-206ENST00000436769 KIR2DL1P43626 348 aaPredicted RBP21.41■■□□□ 1.02
COL6A2-206ENST00000436769 STPG1Q5TH74 334 aa21.41■■□□□ 1.02
COL6A2-206ENST00000436769 EMC10Q5UCC4 262 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms