RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PKMYT1Q99640 499 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 MED10Q9BTT4 135 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 EXOC1Q9NV70 894 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 KBTBD4Q9NVX7 518 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SMPD4Q9NXE4 827 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CFAP97Q9P2B7 532 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 CGNQ9P2M7 1197 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 TFIP11Q9UBB9 837 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
VPS50-203ENST00000436177 PTPRJQ12913 1337 aa8.26□□□□□ -1.09
VPS50-203ENST00000436177 SCN1AP35498 2009 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 LEFTY2O00292 366 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 CLIC2O15247 247 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 TACC1O75410 805 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 APODP05090 189 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 ADRB1P08588 477 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 MBL2P11226 248 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 TCF3P15923 654 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 PTPN1P18031 435 aaKnown RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 LMO2P25791 158 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 ATICP31939 592 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 LIMK1P53667 647 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 AP3M2P53677 418 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 SEC13P55735 322 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 NOP14P78316 857 aaKnown RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 CYP24A1Q07973 514 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 PREPLQ4J6C6 727 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 C2orf27AQ580R0 203 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 ZNF667Q5HYK9 610 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 STPG1Q5TH74 334 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 BTBD8Q5XKL5 378 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 NAIF1Q69YI7 327 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 UNC13DQ70J99 1090 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 FILIP1Q7Z7B0 1213 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 CXorf38Q8TB03 319 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 RIN3Q8TB24 985 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 FBXO32Q969P5 355 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 C8orf48Q96LL4 319 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 MRPL45Q9BRJ2 306 aaKnown RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 EDEM2Q9BV94 578 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 DNAI2Q9GZS0 605 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 GCNT4Q9P109 453 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 BCCIPQ9P287 314 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS50-203ENST00000436177 TBC1D14Q9P2M4 693 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 ANGPTL2Q9UKU9 493 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 CPQQ9Y646 472 aa8.25□□□□□ -1.09
VPS50-203ENST00000436177 NUP210Q8TEM1 1887 aaPredicted RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 MAP1BP46821 2468 aaKnown RBP8.25□□□□□ -1.09
VPS50-203ENST00000436177 ZNF840PA6NDX5 716 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 SCAMP3O14828 347 aaKnown RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 POLR2DO15514 142 aaKnown RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 CAVIN2O95810 425 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 CYP17A1P05093 508 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 FAM163BP0C2L3 166 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 ADH5P11766 374 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 FECHP22830 423 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 YWHAQP27348 245 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 AFMP43652 599 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 MYL6P60660 151 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 USP46P62068 366 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 SLC7A9P82251 487 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 GOLGA8FQ08AF8 430 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 GOLGA8DPQ0D2H9 430 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 TAF10Q12962 218 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 PLK5Q496M5 336 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 DAB2IPQ5VWQ8 1189 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 CNNM4Q6P4Q7 775 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 SCARA5Q6ZMJ2 495 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 EPM2AIP1Q7L775 607 aaPredicted RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 NUP93Q8N1F7 819 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 CCDC33Q8N5R6 958 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 KIAA1958Q8N8K9 716 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 USP33Q8TEY7 942 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 CCDC47Q96A33 483 aaKnown RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 SMARCD1Q96GM5 515 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 ZC3H10Q96K80 434 aaKnown RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 C7orf25Q9BPX7 421 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 TTLL2Q9BWV7 592 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 TPSD1Q9BZJ3 242 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 ZNF518BQ9C0D4 1074 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 BLZF1Q9H2G9 400 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 FBRSL1Q9HCM7 1045 aaKnown RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 POLMQ9NP87 494 aaPredicted RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 SLC39A2Q9NP94 309 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms