RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SURF1Q15526 300 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 HADHQ16836 314 aaKnown RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 CEP128Q6ZU80 1094 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 LRRC8CQ8TDW0 803 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 DCAKDQ8WVC6 231 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ZNF75CPQ92670 426 aaPredicted RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 PTPRN2Q92932 1015 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 GPATCH2LQ9NWQ4 482 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 HAO1Q9UJM8 370 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ALADP13716 330 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 DPYSL3Q14195 570 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 WDR78Q5VTH9 848 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 CCDC62Q6P9F0 684 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 TCP10LQ8TDR4 215 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 C10orf82Q8WW14 230 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 MCRS1Q96EZ8 462 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 TMEM176AQ96HP8 235 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 DHRS4Q9BTZ2 278 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 C2orf40Q9H1Z8 148 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ZFATQ9P243 1243 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 SMG5Q9UPR3 1016 aaKnown RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 A0A087WZ62 844 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 E7ESA3 106 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 APOC4-APOC2K7ER74 178 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 RTN3O95197 1032 aaPredicted RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 CBX6O95503 412 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 APOC2P02655 101 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 T-ENOLP0DO92 83 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ELK3P41970 407 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 SLC10A6Q3KNW5 377 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ADGRD1Q6QNK2 874 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 LMNTD2Q8IXW0 634 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 NLGN2Q8NFZ4 835 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 GRAMD1AQ96CP6 724 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 HEXIM2Q96MH2 286 aaKnown RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 FDXACB1Q9BRP7 624 aaPredicted RBP10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 TNFSF13BQ9Y275 285 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 EFR3BQ9Y2G0 817 aa10.87□□□□□ -0.67
CLSTN1-203ENST00000435891 LTBP3Q9NS15 1303 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 E5RJQ4 531 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 PYGBP11216 843 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 TPP2P29144 1249 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 SCNN1BP51168 640 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 YARSP54577 528 aaKnown RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 CDH6P55285 790 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 AMHR2Q16671 573 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 TBC1D25Q3MII6 688 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 FAXCQ5TGI0 409 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 ZNF449Q6P9G9 518 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 C1orf228Q6PIY5 440 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 RGS9BPQ6ZS82 235 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 ARHGAP22Q7Z5H3 698 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 ADPGKQ9BRR6 497 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 KANSL3Q9P2N6 904 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 RBPJLQ9UBG7 517 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 MED7O43513 233 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 C22orf31O95567 290 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 VTNP04004 478 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 TXNP10599 105 aaKnown RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 RGS7P49802 495 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 SLC18A1P54219 525 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 ATP11AP98196 1134 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 MYLK4Q86YV6 388 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 PALM2Q8IXS6 379 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 DRAXINQ8NBI3 349 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 RXFP2Q8WXD0 754 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 EPAS1Q99814 870 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 TRIM56Q9BRZ2 755 aaKnown RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 MAGEB5Q9BZ81 275 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 NPHS2Q9NP85 383 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 RNF19AQ9NV58 838 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 SENP1Q9P0U3 644 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 DCTN4Q9UJW0 460 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 SMNDC1O75940 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 FAM155BO75949 473 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 LUC7L3O95232 432 aaKnown RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 NDST1P52848 882 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 CUL3Q13618 768 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 KBTBD12Q3ZCT8 623 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 FAM183BPQ6ZVS7 135 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 PCGF5Q86SE9 256 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 LONP2Q86WA8 852 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 VSIG1Q86XK7 387 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 SERAC1Q96JX3 654 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 LRRC37BQ96QE4 947 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 MAF1Q9H063 256 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 CYLDQ9NQC7 956 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 USH1CQ9Y6N9 552 aa10.86□□□□□ -0.67
CLSTN1-203ENST00000435891 hCG_2014768A0A024R1R8 64 aa10.85□□□□□ -0.67
CLSTN1-203ENST00000435891 A0A1B0GVG6 124 aa10.85□□□□□ -0.67
CLSTN1-203ENST00000435891 TCRBV9S1A1TA0A576 114 aa10.85□□□□□ -0.67
CLSTN1-203ENST00000435891 KBTBD13C9JR72 458 aa10.85□□□□□ -0.67
CLSTN1-203ENST00000435891 MCF2LO15068 1137 aa10.85□□□□□ -0.67
CLSTN1-203ENST00000435891 RNF8O76064 485 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms