RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DCNP07585 359 aaKnown RBP17.16■□□□□ 0.34
SMPD4-207ENST00000435455 ZDHHC11BP0C7U3 371 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 CD72P21854 359 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 TUBP50607 506 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 BCAT1P54687 386 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 TMEM270Q6UE05 265 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 RRAGAQ7L523 313 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 GPRIN1Q7Z2K8 1008 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 RALGPS2Q86X27 583 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-207ENST00000435455 ARHGEF19Q8IW93 802 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 KIAA1958Q8N8K9 716 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 FAM83CQ9BQN1 747 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 TLR8Q9NR97 1041 aaKnown RBP17.16■□□□□ 0.34
SMPD4-207ENST00000435455 DLGAP2Q9P1A6 1054 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
SMPD4-207ENST00000435455 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-207ENST00000435455 TARSP26639 723 aaKnown RBP17.15■□□□□ 0.34
SMPD4-207ENST00000435455 IFNAR2P48551 515 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 KIF11P52732 1056 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 TNK2Q07912 1038 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 STILQ15468 1287 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 EXOC3L4Q17RC7 722 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 GOLGA7BQ2TAP0 167 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 ENOSF1Q7L5Y1 443 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 RBBP8NLQ8NC74 664 aaPredicted RBP17.15■□□□□ 0.34
SMPD4-207ENST00000435455 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 RIN3Q8TB24 985 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 FAM3CQ92520 227 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 KAT5Q92993 513 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 ATP2A3Q93084 1043 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 CRACR2AQ9BSW2 395 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 RNF38Q9H0F5 515 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 ANO10Q9NW15 660 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
SMPD4-207ENST00000435455 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 TSPAN16Q9UKR8 245 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 CPQQ9Y646 472 aa17.15■□□□□ 0.34
SMPD4-207ENST00000435455 SHISA7A6NL88 538 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 LEFTY2O00292 366 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 COCHO43405 550 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 MBL2P11226 248 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 CTHP32929 405 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 RPS9P46781 194 aaKnown RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 MFAP3P55082 362 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 BST2Q10589 180 aaKnown RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 RUNX3Q13761 415 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 STX1AQ16623 288 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 SMYD5Q6GMV2 418 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 TRIM65Q6PJ69 517 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 CCDC186Q7Z3E2 898 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 TTC30AQ86WT1 665 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 ENOX1Q8TC92 643 aaKnown RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 OSCP1Q8WVF1 389 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 CLDN23Q96B33 292 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 FAM122AQ96E09 287 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 KREMEN1Q96MU8 473 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 TUBGCP2Q9BSJ2 902 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 CCSER2Q9H7U1 834 aa17.14■□□□□ 0.33
SMPD4-207ENST00000435455 UBE2TQ9NPD8 197 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-207ENST00000435455 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 O00370 1275 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-207ENST00000435455 XPO1O14980 1071 aaKnown RBP17.13■□□□□ 0.33
SMPD4-207ENST00000435455 CYP26A1O43174 497 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 TLR5O60602 858 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 EEF1GP26641 437 aaKnown RBP17.13■□□□□ 0.33
SMPD4-207ENST00000435455 SOX9P48436 509 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 PSEN1P49768 467 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 ZNF132P52740 706 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 AMPD2Q01433 879 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 TCF15Q12870 199 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 CNGA2Q16280 664 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 LCLAT1Q6UWP7 414 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 TTC8Q8TAM2 541 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 NACA2Q9H009 215 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 EBF3Q9H4W6 596 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 HPS4Q9NQG7 708 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 SMPD4Q9NXE4 827 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 CNTN6Q9UQ52 1028 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 NFE2L3Q9Y4A8 694 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 USP3Q9Y6I4 520 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 CACNA1IQ9P0X4 2223 aa17.13■□□□□ 0.33
SMPD4-207ENST00000435455 RNF225M0QZC1 329 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-207ENST00000435455 ARSAP15289 507 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 SLC9A1P19634 815 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 PLA2G5P39877 138 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 ZXDBP98169 803 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 PDE4CQ08493 712 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 NR1H3Q13133 447 aa17.12■□□□□ 0.33
SMPD4-207ENST00000435455 VWA3BQ502W6 1294 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms